Green Archiving For USF Faculty: Getting Started

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Submissions from 2016

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Subcellular and in-vivo Nano-Endoscopy, Surya Venkatasekhar Cheemalapati, John Winskas, Hao Wang, Karthik Konnaiyan, Arseny Zhdanov, Alison Roth, Swamy Rakesh Adapa, Andrew Deonarine, Rays H. Y. Jiang, and Anna Pyayt

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Driver Injury Severity Outcome Analysis in Rural Interstate Highway Crashes: a Two-Level Bayesian Logistic Regression Interpretation, Cong Chen, Guohui Zhang, Xiaoyue Cathy Liu, Yusheng Ci, Helai Huang, Jianming Ma, Yanyan Chen, and Hongzhi Guan

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Examining Driver Injury Severity Outcomes in Rural Non-Interstate Roadway Crashes Using a Hierarchical Ordered Logit Model, Cong Chen, Guohui Zhang, Helai Huang, Jiangfeng Wang, and Rafiqul Tarefder

Big Data Analysis and Knowledge Discovery for Smart City Development Enhancement, Cong Chen, Guohui Zhang, Xiaolei Ma, and Yinhai Wang

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Investigating Driver Injury Severity Patterns in Rollover Crashes Using Support Vector Machine Models, Cong Chen, Guohui Zhang, Zhen Qian, Rafiqul Tarefder, and Zong Tian

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An Explanatory Analysis of Driver Injury Severity in Rear-End Crashes Using a Decision Table/Naïve Bayes (Dtnb) Hybrid Classifier, Cong Chen, Guohui Zhang, Jinfu Yang, John C. Milton, and Adélamar Alcántara

Fast Monte Carlo Simulation-based Process Design and Planning for Carbon Nanotube Synthesis, Changqing Cheng, Satish T. Bukkapatnum, Lionel Raff, and Ranga Komanduri

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Measuring Beach Profiles along a Low-Wave Energy Microtidal Coast, West-Central Florida, USA, Jun Cheng, Ping Wang, and Qiandong Guo

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Landscaping of Highway Medians and Roadway Safety at Unsignalized Intersections, Hongyun Chen, Aldo Fabregas, and Pei-Sung Lin

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Interface‐Coupled BiFeO3/BiMnO3 Superlattices with Magnetic Transition Temperature up to 410 K, Eun-Mi Choi, Josée E. Kliebeuker, Thomas Fix, Jie Xiong, Christy J. Kinane, Dario Arena, Sean Langridge, Aiping Chen, Zhenxing Bi, Joon Hwan Lee, Quanix Jia, Mark G. Blamire, and Judith L. MacManus-Driscoll

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Integrated Supply Chain Management for Perishable Products: Dynamics and Oligopolistic Competition Perspectives with Application to Pharmaceuticals, Sung Hoon Chung and Changhyun Kwon

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Comparing the Effectiveness of Blended, Semi-Flipped, and Flipped Formats in an Engineering Numerical Methods Course, Renee M. Clark, Autar Kaw, and Mary Besterfield-Sacre

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Quandle Coloring and Cocycle Invariants of Composite Knots and Abelian Extensions, W Edwin Clark, Masahico Saito, and Leandro Vendramin

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Do Geographically Isolated Wetlands Influence Landscape Functions?, Matthew J. Cohen, Irena F. Creed, Laurie Alexander, Nandita B. Basu, Aram J.K. Calhoun, Christopher Craft, Ellen D'Amico, Edward DeKeyser, Laurie Fowler, Heather E. Golden, James W. Jawitz, Peter Kalla, L. Katherine Kirkman, Charles R. Lane, Megan Lang, Scott G. Leibowitz, David B. Lewis, John Marton, Daniel L. McLaughlin, David M. Mushet, Hadas Raanan-Kiperwas, Mark C. Rains, Lora Smith, and Susan C. Walls

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Reply to Chen Et Al, Ted Cohen, Leonid Chindelevitch, Reshma Misra, Maria E. Kempner, Jerome T. Galea, Prashini Moodley, and Douglas Wilson

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Within-Host Heterogeneity of Mycobacterium Tuberculosis Infection is Associated with Poor Early Treatment Response: a Prospective Cohort Study, Ted Cohen, Leon Chindelevitch, Reshma Misra, Maria E. Kempner, Jerome T. Galea, Prashini Moodley, and Douglas Wilson

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The Growth Response of Two Diatom Species to Atmospheric Dust from the Last Glacial Maximum, Tim M. Conway, Linn J. Hoffmann, Eike Breitbarth, Robert F. Strzepek, and Eric W. Wolff

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Removal of Six Estrogenic Endocrine-Disrupting Compounds (EDCs) from Municipal Wastewater Using Aluminum Electrocoagulation, Monica M. Cook, Erin M. Symonds, Bert Gerber, Armando Hoare, Edward S. Van Vleet, and Mya Breitbart

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The Proximal Effects of Acute Alcohol Consumption on Male-to-Female Aggression: A Meta-Analytic Review of the Experimental Literature, Cory A Crane, Stephanie A Godleski, Sarahmona M Przybyla, Robert C Schlauch, and Maria Testa

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Comorbid Substance Use Diagnoses and Partner Violence among Offenders Receiving Pharmacotherapy for Opioid Dependence, Cory A. Crane, Robert C. Schlauch, Susan Devine, and Caroline J. Easton

Strategies and Resources for Career Research, N. Cunningham, K. N. Fowler, and Nora B. Wood

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Feasibility Study of Land Cover Classification Based on Normalized Difference Vegetation Index for Landslide Risk Assessment, Thilanki Dahigamuwa, Qiuyan Yu, and Manjriker Gunaratne

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Assessing the Impacts of Oil-associated Marine Snow Formation and Sedimentation during and after the Deepwater Horizon Oil Spill, Kendra L. Daly, Uta Passow, Jeffrey Chanton, and David Hollander

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School Counselors and Illness-Related Trauma: Personal Reflections from an African Outreach Experience, Eric S. Davis

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Using Song Lyrics to Enhance Counselor Trainee Perceptions of their Reflective Listening Skills, Eric S. Davis and Jennifer Pereira

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Celebrity Health Announcements and Online Health Information Seeking: An Analysis of Angelina Jolie’s Preventative Health Decision, Marleah Dean

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Communicating in Patient-Provider Relationships, Marleah Dean

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Coping Together, Side by side: Enhancing Mother–Daughter Communication Across the Breast Cancer Journey, Marleah Dean

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“It’s Not if I Get Cancer, It’s when I Get Cancer”: BRCA-Positive Patients’ (Un)certain Health Experiences Regarding Hereditary Breast and Ovarian Cancer Risk, Marleah Dean

The Lump that Changed our Lives: Using Patient Health Narratives to Drive Hereditary Cancer Research, Marleah Dean

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“Let’s Sit Forward”: Investigating Interprofessional Communication, Collaboration, Professional Roles, and Physical Space at EmergiCare, Marleah Dean, Rebecca Gill, and Joshua Barbour

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Dynamics and Thermal Sensitivity of Ballistic and Non-ballistic Feeding in Salamanders, Stephen M, Deban and Jeffrey A. Scales

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The Two-Component System CpxRA Negatively Regulates the Locus of Enterocyte Effacement of Enterohemorrhagic Escherichia coli Involving σ32 and Lon protease, Miguel A. De la Cruz, Jason K. Morgan, Miguel A. Ares, Jorge A. Yáñez-Santos, James T. Riordan, and Jorge A. Girón

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Reintroducing Environmental Change Drivers in Biodiversity-Ecosystem Functioning Research., Frederik De Laender, Jason R. Rohr, Roman Ashauer, Donald J Baird, Uta Berger, Nico Eisenhauer, Volker Grimm, Udo Hommen, Lorraine Maltby, and Carlos J Meliàn

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Impact of Brief Intervention Services on Drug-Using Truant Youths' Self-Reported Delinquency and Arrest Charges: A Longitudinal Study, Richard Dembo, James Schmeidler, Jennifer Wareham, Rhissa Briones-Robinson, Ken C. Winters, and Rocio Ungaro

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Differential Effects of Mental Health Problems Among Truant Youths, Richard Dembo, Jennifer Wareham, James Schmeidler, Rhissa Briones-Robinson, and Ken C. Winters

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Longitudinal Effects of a Second-Order Multi-Problem Factor of Sexual Risk, Marijuana Use, and Delinquency on Future Arrest Among Truant Youths, Richard Dembo, Jennifer Wareham, James Schmeidler, and Ken Winters

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Exploratory Two-level Analysis of Individual- and School-level Factors on Truant Youth Emotional/Psychological Functioning, Richard Dembo, Jennifer Wareham, James Schmeidler, and Ken C. Winters

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On Quality-of-Service Provisioning in IEEE 802.11ax WLANs, Der-Jiunn Deng, Shao-Yu Lien, Jordan Lee, and Kwang-Cheng Chen

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La Florida: Five Hundred Years of Hispanic Presence, Viviana Diaz-Balsera and Rachel A. May

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Gut Immunity in a Protochordate Involves a Secreted Immunoglobulin-type Mediator Binding Host Chitin and Bacteria, Larry J. Dishaw, Brittany Leigh, John P. Cannon, Assunta Liberti, M. Gail Mueller, Diana P. Skapura, Charlotte R. Karrer, Maria R. Pinto, Rosaria De Santis, and Gary W. Litman

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Charge-Induced Fluctuation Forces in Graphitic Nanostructures, D. Drosdoff, Igor V. Bondarev, Allan Wisdom, Rudolf Podogrnik, and Lilia M. Woods

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Evaluating Climatic Response to External Radiative Forcing during the Late Miocene to Early Pliocene: New Perspectives from Eastern Equatorial Pacific (IODP U1338) and North Atlantic (ODP 982) Locations, Anna J. Drury, Cédric M. John, and Amelia E. Shevenell

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A Vernacular of Surveillance: Taylor Swift and Miley Cyrus Perform White Authenticity, Rachel E. Dubrofsky

Plan to Pose Purposeful Questions, L. Dupree and Sarah van Ingen

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Measurement of Elastic Modulus of Collagen Type I Single Fiber, Pavel Dutov, Olga Antipova, Sameer Varma, Joseph P R O Orgel, and Jay D Schieber

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MIR494 Reduces Renal Cancer Cell Survival Coinciding with Increased Lipid Droplets and Mitochondrial Changes, Punashi Dutta, Edward Haller, Arielle Sharp, and Meera Nanjundan

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Microfocusing at the PG1 beamline at FLASH, S. Dziarzhytski, N. Gerasimova, Rene Goderich, T. Mey, M. Rübhausen, F. Siewert, H. Weigelt, and G. Brenner

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Improved Student Learning through a Faculty Learning Community: How Faculty Collaboration Transformed a Large-Enrollment Course from Lecture to Student Centered, Emily R. Elliott, Robert D. Reason, Clark R. Coffman, Eric J. Gangloff, Jeffrey R Raker, Jo Anne Powell-Coffman, and Craig A. Ogilvie

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A Tool for Beamforming and Real-Time Link Budget Analysis in Aeronautical Communications Using Kinematics, M. Cenk Erturk and Yasin Aksan

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Regulating Hazardous Materials Transportation by Dual Toll Pricing, Tolou Esfandeh, Changhyun Kwon, and Rajan Batta

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Dissolved Iron and Iron Isotopes in the Southeastern Pacific Ocean, Jessica N. Fitzsimmons, Tim M. Conway, Jong-Mi Lee, Richard Kayser, Kristen M. Thyng, Seth G. John, and Edward A. Boyle

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Control of Phosphorus Concentration through Adsorption and Desorption in Shallow Groundwater of Subtropical Carbonate Estuary, Hilary Flower, Mark Rains, David B. Lewis, Jia-Zhong Zhang, and René Price

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Anticipatory Coarticulation and Stability of Speech in Typically Fluent Speakers and People Who Stutter, Stefan A. Frisch, Nathan Maxfield, and Alissa Belmont

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Velar–vowel Coarticulation in a Virtual Target Model of Stop Production, Stefan A. Frisch and Sylvie M. Wodzinski

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Age-Related Hearing Loss: Prevention of Threshold Declines, Cell Loss and Apoptosis in Spiral Ganglion Neurons, Robert D. Frisina, Bo Ding, Xiaoxia Zhu, and Joseph P. Walton

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Introduction, Jeremy Fyke, Jeralyn Faris, and Patrice M. Buzzanell

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Preface, Jeremy Fyke, Jeralyn Faris, and Patrice M. Buzzanell

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Rectal Douching Prevalence and Practices Among Peruvian Men Who Have Sex with Men and Transwomen: Implications for Rectal Microbicides, Jerome T. Galea, Janni J. Kinsler, Sarah McLean, Gino Calvo, Hugo Sánchez, Segundo R. Leon, and Brandon Brown

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Sleep Disturbances among Older Adults in the United States, 2002–2012: Nationwide Inpatient Rates, Predictors, and Outcomes, Alyssa A. Gamaldo, May A. Beydoun, Hind A. Beydoun, Hailun Liang, Rachel E. Salas, Alan B. Zonderman, Charlene E. Gamaldo, and Shaker M. Eid

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How the Bending Kinematics of Swimming Lampreys Build Negative Pressure Fields for Suction Thrust, Brad J. Gemmell, Stephanie M. Fogerson, John H. Costello, Jennifer R. Morgan, John O. Dabiri, and Sean P. Colin

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Changes in Physical Functioning and Muscle Strength in Men Receiving Androgen Deprivation Therapy for Prostate Cancer: a Controlled Comparison, Brian D. Gonzalex, Heather S. L. Jim, Brent J. Small, Mayer N. Fishman, Babu Zachariah, Randy V. Heysek, and Paul B. Jacobsen

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Secondary Structure Adopted by the Gly-Gly-X Repetitive Regions of Dragline Spider Silk, Geoffrey M Gray, Arjan van der Vaart, Chengchen Guo, Justin Jones, David Onofrei, Brian R Cherry, Randolph V Lewis, Jeffery L Yarger, and Gregory P Holland

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Systematic Replication of the Effects of a Supplementary, Technology-assisted, Storybook Intervention for Preschool Children with Weak Vocabulary and Comprehension Skills, Charles R. Greenwood, Judith J. Carta, Elizabeth S. Kelley, Gabriela Guerrero, Na Young Kong, Jane Atwater, and Howard Goldstein

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Book Review: Archives Alive: Expanding Engagement with Public Library Archives and Special Collections, Melanie Griffin

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Anomaly Detection from Hyperspectral Remote Sensing Imagery, Qiandong Guo, Ruiliang Pu, and Jun Cheng

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E-Petition Popularity: Do Linguistic and Semantic Factors Matter?, Loni Hagen, Teresa M. Harrison, Özlem Uzuner, William May, Tim Fake, and Satya Katragadda

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A Comparison of Rule-based Analysis with Regression Methods in Understanding the Risk Factors for Study Withdrawal in a Pediatric Study, Mona Haghighi, Suzanne B. Johnson, Xiaoning Qian, Kristian F. Lynch, Kendra Vehik, Shuai Huang, and The TEDDY Study Group

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The Effect of Noise Fluctuation and Spectral Bandwidth on Gap Detection, Joseph W. Hall III, Emily Buss, Erol J. Ozmeral, and John H. Grose

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Two-Dimensional Kinetic Shape Dynamics: Verification and Application, Ismet Handžić, Haris Muratagic, and Kyle B. Reed

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Changes in Sediment Redox Conditions Following the BP DWH Blowout Event, D. W. Hastings, Patrick Schwing, G. R. Brooks, R. A. Larson, J. L. Morford, T. Roeder, K. A. Quinn, T. Bartlett, Isabel C. Romero, and David Hollander

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Predicting Malignant Nodules from Screening CT Scans, Samuel Hawkins, Hua Wang, Ying Liu, Alberto Garcia, Olya Stringfield, Henry Krewer, Qiang Li, Dmitry Cherezov, Matthew Schabath, Lawrence O. Hall, and Robert J. Gillies

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Emotion Regulation During Threat: Parsing the Time Course and Consequences of Safety Signal Processing, Kathryn R. Hefner, Edelyn Verona, and John J. Curtin

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Functional Performance Differences between the Genium and C-Leg Prosthetic Knees and Intact Knees, Michael J. Highsmith, Jason T. Kahle, Rebecca M. Miro, M. E. Cress, Derek J. Lura, William S. Quillen, Stephanie Carey, Rajiv V. Dubey, and Larry J. Mengelkoch

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Greenland Subglacial Drainage Evolution Regulated by Weakly Connected Regions of the Bed, Matthew J. Hoffman, Lauren C. Andrews, Stephen F. Price, Ginny A. Catania, Thomas A. Neumann, Martin P. Lüthi, Jason Gulley, Claudia Ryser, Robert L. Hawley, and Blaine Morriss

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Quantifying Trace Element and Isotope Fluxes at the Ocean-sediment Boundary: A Review., William B Homoky, Thomas Weber, William M Berelson, Tim M Conway, Gideon M Henderson, Marco van Hulten, Catherine Jeandel, Silke Severmann, and Alessandro Tagliabue

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Recent Data Sets on Object Manipulation: A Survey, Yongqiang Huang, Matteo Bianchi, Minas Liarokapis, and Yu Sun

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Datasets on Object Manipulation and Interaction: A Survey, Yongqiang Huang and Yu Sun

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Anions Govern Cell Volume: A Case Study of Relative Astrocytic and Neuronal Swelling in Spreading Depolarization, Niklas Hübel and Ghanim Ullah

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Impact of Not Addressing Partially Cross-Classified Multilevel Structure in Testing Measurement Invariance: A Monte Carlo Study, Myung H. Im, Eun Sook Kim, Oi-Man Kwok, Myeongsun Yoon, and Victor L. Willson

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Signal Enhanced Holographic Fluorescence Microscopy with Guide-star Reconstruction, Changwon Jang, David C. Clark, Jonghyun Kim, Byoungho Lee, and Myung K. Kim

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Emotional Confidants in Ethnic Communities: Social Network Analysis of Korean American Older Adults, Yuri Jang PhD, Kyungmin Kim PhD, Nan Sook Park, and David A. Chiriboga

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Health Vulnerability of Immigrants with Limited English Proficiency: A Study of Older Korean Americans, Yuri Jang, Hyunwoo Yoon, Nan Sook Park, and David A. Chiriboga

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Darwinian Sex Roles Confirmed across the Animal Kingdom, Tim Janicke, Ines K. Häderer, Marc J. Lajeunesse, and Nils Anthes

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NEDDylation Promotes Stress Granule Assembly, Aravinth Kumar Jayabalan, Anthony Sanchez, Ra Young Park, Sang Pil Yoon, Gum-Yong Kang, Je-Hyun Baek, Paul Anderson, Younghoon Kee, and Takbum Ohn

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Combined Effects of Pesticides and Trematode Infections on Hourglass Tree Frog Polypedates cruciger., Uthpala A. Jayawardena, Jason R. Rohr, Ayanthi N. Navaratne, Priyanie H. Amerasinghe, and Rupika S. Rajakaruna

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Glycine N-acyltransferase-like 3 is Responsible for Long-chain N-acylglycine Formation in N18TG2 Cells, Kristen A Jeffries, Daniel R Dempsey, Emma K Farrell, Ryan L Anderson, Gabrielle J Garbade, Tatyana S Gurina, Imran Gruhonjic, Carly A Gunderson, and David J Merkler

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A Low-loss Metasurface Antireflection Coating on Dispersive Surface Plasmon Structure, Jiyeon Jeon, Khagendra Bhattarai, Deok-Kee Kim, Jun Oh Kim, Augustine Urbas, Sang Jun Lee, Zahyun Ku, and Jiangfeng Zhou

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A Practical Application of Reduced-Copper Antifouling Paint in Marine Biological Research, Andrea S Jerabek, Kara R Wall, and Christopher D Stallings

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The Great Chain of Being: Manifesto on the Problem of Agency in Science Communication, Meredith A. Johnson and Nathan Johnson

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Scholar Commons Annual Report: FY 2014-2015, Chelsea Johnston, Carol Ann Borchert, and Jason Boczar

Controller, Steven E. Jones

New Media and Modeling: Games and the Digital Humanities, Steven E. Jones

Roberto Busa, S. J., and the Emergence of Humanities Computing: The Priest and the Punched Cards, Steven E. Jones

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The Emergence of the Digital Humanities (as the Network is Everting), Steven E. Jones

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Counter Machines and Crystallographic Structures, Natasha Jonoska, Mile Krajcevski, and Gregory McColm

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Performing the ‘Two-Body Problem’: An Analysis of Academic Couples’ Career Sensemaking as Revealed Through Joint Storytelling, Jane Jorgenson

Radiomics of Lung Nodules: A Multi- Institutional Study of Robustness and Agreement of Quantitative Imaging Features, Jayashree Kalpahty-Cramer, Artem Mamomov, Binsheng Zhao, Lin Lu, Dmitry Cherezov, Sandy Napel, Sebastian Echegrary, Daniel Rubin, Michael McNitt-Gray, and Dmitry Goldgof

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A Buffer Model Account of Behavioral and ERP Patterns in the Von Restorff Paradigm, Siri-Maria Kamp, Melissa Lehman, Kenneth J. Malmberg, and Emanuel Donchin

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Communication Perspectives on a Luxury Brand Organization: The Case of Georg Jensen, Esben Karmark, Robyn Remke, Patrice M. Buzzanell, Brigid Carroll, Gail Fairhurst, Flemming Holm, and Lars Thøger Christensen