This is a select list of works produced by the faculty of the USF College of Marine Science. Materials are included when two conditions are satisfied: 1) the creator approves inclusion and 2) the publisher allows the material to be placed in the repository. Please direct questions or requests to expand the list of materials to Jason Boczar.

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Submissions from 2019

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Statistical Simulation of Ocean Current Patterns Using Autoregressive Logistic Regression Models: a Case Study in the Gulf of Mexico, Helios Chiri, Ana J. Abascal, Sonia Castanedo, José A. A. Antolínez, Yonggang Liu, Robert H. Weisberg, and Raul Medina

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Surface Layer Turbulence Parameters Derived from 1-S Wind Observations on the West Florida Shelf, Dennis A. Mayer, Jun A. Zhang, and Robert H. Weisberg

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Prevalence of a vertically transmitted single-stranded DNA virus in spinybacked orbweavers (Gasteracantha cancriformis) from Florida, USA, Karyna Rosario, Kaitlin A. Mettel, Anthony M. Greco, and Mya Breitbart

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Physical and Biogeochemical Controls on the Distribution of Dissolved Cadmium and its Isotopes in the Southwest Pacific Ocean, M. Sieber, Tim M. Conway, G. F. de Souza, H. Obata, S. Takano, Y. Sohrin, and D. Vance

Submissions from 2018

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The Tampa Bay Coastal Ocean Model Performance for Hurricane Irma, Jing Chen, Robert H. Weisberg, Yonggang Liu, and Lianyuan Zheng

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The GEOTRACES Intermediate Data Product 2017, ConwayGEOTRACES and Tim M. Conway

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Gulf Stream Rings as a Source of Iron to the North Atlantic Subtropical Gyre, Tim M. Conway, Jaime B. Palter, and Gregory F. de Souza

Replacement Times of a Spectrum of Elements in the North Atlantic Based on Thorium Supply, Christopher T. Hayes, Robert F. Anderson, Hai Cheng, Tim M. Conway, R. L. Edwards, Martin Q. Fleisher, Peng Ho, Kuo-Fang Huang, Seth G. John, and William M. Landing

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Evaluation of Satellite-Derived SST Products in Identifying the Rapid Temperature Drop on the West Florida Shelf Associated with Hurricane Irma, Yonggang Liu, Robert H. Weisberg, Jason Law, and Boyin Huang

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Ecosystem Model of the Entire Beaufort Sea Marine Ecosystem: A Temporal Tool for Assessing Food-Web Structure and Marine Animal Populations from 1970 to 2014, Paul M. Suprenand, Cameron H. Ainsworth, and Carie Hoover

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Ecological and Indigenous Community Impacts of Oil Spill Mortality in Alaskan Marine Ecosystems, Paul M. Suprenand, Carie Hoover, Cameron H. Ainsworth, L. Dornberger, and C. J. Johnson

Submissions from 2017

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Ecopath with Ecosim Model of the West Florida Shelf Representing 1980 for Harmful Algal Bloom Simulations, Cameron H. Ainsworth and Alisha Gray

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Inter-Calibration of a Proposed New Primary Reference Standard AA-ETH Zn for Zinc Isotopic Analysis, Corey Archer, Morten B. Anderson, Christophe Cloquet, Tim M. Conway, Shoufei Dong, Michael Ellwood, Rebekah Moore, Joey Nelson, and Mark Rehkamper

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Winds on the West Florida Shelf: Regional Comparisons between Observations and Model Estimates, Dennis A. Mayer, Robert H. Weisberg, Lianyuan Zheng, and Yonggang Liu

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The Acceleration of Dissolved Cobalt's Ecological Stoichiometry due to Biological Uptake, Remineralization, and Scavenging in the Atlantic Ocean, Mak A. Saito, Abagail E. Noble, Nicholas Hawco, Benjamin S. Twining, Daniel C. Ohnemus, Seth G. John, Phoebe Lam, Tim M. Conway, Rod Johnson, Dawn Moran, and Matthew McIlvin

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Southward Flow on the Western Flank of the Florida Current, Alexander V. Soloviev, Amy Hirons, Christopher Maingot, Cayla W. Dean, Richard E. Dodge, Alexander E. Yankovsky, Jon Wood, Robert H. Weisberg, Mark E. Luther, and Julian P. McCreary

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More Surprises in the Global Greenhouse: Human Health Impacts from Recent Toxic Marine Aerosol Formations, Due to Centennial Alterations of World-Wide Coastal Food Webs, John J. Walsh, Jason M. Lenes, Robert H. Weisberg, Lianyuan Zheng, Chuanmin Hu, Kent A. Fanning Ph.D., R. Snyder, and J. Smith

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Variability of Tropical Cyclone Rapid Intensification in the North Atlantic and Its Relationship with Climate Variations, Chunzai Wang, Xidong Wang, Robert H. Weisberg, and Michael L. Black

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On the Loop Current Penetration into the Gulf of Mexico, Robert H. Weisberg and Yonggang Liu

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On the Movement of Deepwater Horizon Oil to Northern Gulf Beaches, Robert H. Weisberg, Lianyuan Zheng, and Yonggang Liu

Submissions from 2016

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Predator-prey diet linkages with error range for the Gulf of Mexico fitted using maximum likelihood method, Cameron H. Ainsworth

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Island building in the South China Sea: detection of turbidity plumes and artificial islands using Landsat and MODIS data, Brian B. Barnes and Chuanmin Hu

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Toxicity and Mutagenicity of the Gulf of Mexico Waters during and after the Deepwater Horizon oil spill, July 2010 to August 2012, Jonelle Basso

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The Growth Response of Two Diatom Species to Atmospheric Dust from the Last Glacial Maximum, Tim M. Conway, Linn J. Hoffmann, Eike Breitbarth, Robert F. Strzepek, and Eric W. Wolff

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Intercomparison of Dissolved Iron Isotope Profiles from Reoccupation of three GEOTRACES Stations in the Atlantic Ocean, Tim M. Conway, Seth G. John, and F. Lacan

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Removal of Six Estrogenic Endocrine-Disrupting Compounds (EDCs) from Municipal Wastewater Using Aluminum Electrocoagulation, Monica M. Cook, Erin M. Symonds, Bert Gerber, Armando Hoare, Edward S. Van Vleet, and Mya Breitbart

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CTD and other environmental data for the northeastern Gulf of Mexico and west Florida shelf: June 2012 – August 2014, Kendra L. Daly

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Discrete chlorophyll data for the northeastern Gulf of Mexico and west Florida shelf: June 2012 – August 2014, Kendra L. Daly

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SIPPER plankton and marine snow abundance and distribution data for the northeastern Gulf of Mexico: June 2012 – August 2014, Kendra L. Daly

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Zooplankton abundance and distribution data for the northeastern Gulf of Mexico and west Florida shelf: June 2012 – August 2014, Kendra L. Daly

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Zooplankton Biomass on the West Florida Shelf, July 2010 – August 2014, Kendra L. Daly

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Zooplankton dry weight biomass data for the northeastern Gulf of Mexico and west Florida shelf: June 2012 – August 2014, Kendra L. Daly

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Assessing the Impacts of Oil-associated Marine Snow Formation and Sedimentation during and after the Deepwater Horizon Oil Spill, Kendra L. Daly, Uta Passow, Jeffrey Chanton, and David Hollander

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Gut Immunity in a Protochordate Involves a Secreted Immunoglobulin-type Mediator Binding Host Chitin and Bacteria, Larry J. Dishaw, Brittany Leigh, John P. Cannon, Assunta Liberti, M. Gail Mueller, Diana P. Skapura, Charlotte R. Karrer, Maria R. Pinto, Rosaria De Santis, and Gary W. Litman

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Spatial distributions of fish and invertebrates in the Gulf of Mexico for 2010-01-01 estimated using a statistical model, Michael Drexler

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Evaluating Climatic Response to External Radiative Forcing during the Late Miocene to Early Pliocene: New Perspectives from Eastern Equatorial Pacific (IODP U1338) and North Atlantic (ODP 982) Locations, Anna J. Drury, Cédric M. John, and Amelia E. Shevenell

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Dissolved Iron and Iron Isotopes in the Southeastern Pacific Ocean, Jessica N. Fitzsimmons, Tim M. Conway, Jong-Mi Lee, Richard Kayser, Kristen M. Thyng, Seth G. John, and Edward A. Boyle

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Changes in Sediment Redox Conditions Following the BP DWH Blowout Event, D. W. Hastings, Patrick Schwing, G. R. Brooks, R. A. Larson, J. L. Morford, T. Roeder, K. A. Quinn, T. Bartlett, Isabel C. Romero, and David Hollander

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Quantifying Trace Element and Isotope Fluxes at the Ocean-sediment Boundary: A Review., William B. Homoky, Thomas Weber, William M. Berelson, Tim M. Conway, Gideon M. Henderson, Marco van Hulten, Catherine Jeandel, Silke Severmann, and Alessandro Tagliabue

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Satellite, glider data, and field measurements to study harmful algae on the West Florida Shelf during 2011 and 2012, Chuanmin Hu

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Developing a Smart Semantic Web with Linked Data and Models for Near-Real-Time Monitoring of Red Tides in the Eastern Gulf of Mexico, Chuanmin Hu, Brock Murch, Alina A. Corcoran, Lianyuan Zheng, Brian Burnel B., Robert H. Weisberg, Karen E. Atwood, and Jason M. Lenes

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A Practical Application of Reduced-Copper Antifouling Paint in Marine Biological Research, Andrea S Jerabek, Kara R Wall, and Christopher D Stallings

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Seascapes as a New Vernacular for Pelagic Ocean Monitoring, Management and Conservation, Maria T. Kavanaugh, Matthew J. Oliver, Francisco P. Chavez, Ricardo M. Letelier, Frank E. Muller-Karger, and Scott C. Doney

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Coral-Associated Bacterial Diversity Is Conserved across Two Deep-Sea Anthothela Species, Stephanie N. Lawler, Christina A Kellogg, Scott C. France, Rachel W. Clostio, Sandra D. Brooke, and Steve W. Ross

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Generation of Germ-Free /Ciona intestinalis for Studies of Gut-Microbe Interactions, Brittany A Leigh, Assunta Liberti, and Larry J Dishaw

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Dataset for: Simulating cell death in the termination of Karenia brevis blooms: Implications for predicting aerosol toxicity vectors to humans, Jason M. Lenes

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Offshore Forcing on the “Pressure Point” of the West Florida Shelf: Anomalous Upwelling and Its Influence on Harmful Algal Blooms, Yonggang Liu, Robert H. Weisberg, Jason M. Lenes, Lianyuan Zheng, Katherine Hubbard, and John J. Walsh

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Patterns of the Loop Current System and Regions of Sea Surface Height Variability in the Eastern Gulf of Mexico Revealed by the Self-Organizing Maps, Yonggang Liu, Robert H. Weisberg, Stefano Vignudelli, and Gary T. Mitchum

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Synchronicity between Ice Retreat and Phytoplankton Bloom in Circum‐Antarctic Polynyas, Yun Li, Rubao Ji, Meibing Jin, and Julienne Stroeve

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Sunlight Induced Chlorophyll fluorescence in the Near-Infrared Spectral Region in Natural Waters: Interpretations of the Narrow Reflectance Peak around 761nm, Yingcheng Lu, Linhai Li, Minwei Zhang, Shaojie Sun, and Chunguang Lv

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West Florida Shelf beach sediment PAH and dioctyl sodium sulfosuccinate concentrations, microtox luminescence and microscreen mutagenicity data, 2010 to 2013, Lauren D. McDaniel

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A Compilation of Global Bio-optical in Situ Data for Ocean-colour Satellite Applications, Frank Muller-Karger

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Lesion data from fish collected off Terrebonne Bay, LA to the Dry Tortugas, FL, 2011-2014, Steven Murawski

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PAH Analysis: Bile PAH metabolite concentrations in longline captured fish, Northern Gulf of Mexico, 2011, Steven Murawski

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PAH analysis: Muscle and liver PAH concentrations in longline captured fish, Northern Gulf of Mexico, 2011-2013, Steven Murawski

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PAH Analysis: Red Snapper Bile PAH Metabolite Concentrations, Northern Gulf of Mexico, 2012, Steven Murawski

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Golden Tilefish tissue and eye-lens stable isotopes and C:N ratios from the Gulf of Mexico, summer 2013, Jenny Fenton Ostroff

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Hearing in the Juvenile Green Sea Turtle (Chelonia mydas): A Comparison of Underwater and Aerial Hearing Using Auditory Evoked Potentials, Wendy E D Piniak, David A Mann, Craig A Harms, T Todd Jones, and Scott A Eckert

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Variability of Particle Size Distributions in the Bohai Sea and the Yellow Sea, Zhongfeng Qui, Deyong Sun, Chuanmin Hu, Sengquiang Wang, Lufei Zheng, Yu Huang, and Tian Peng

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Chemical analysis of sediment and fish species near the Hercules 265 blowout, Gulf of Mexico, 2013, Isabel Romero

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Hydrocarbons in deep-sea sediments following the 2010 Deepwater Horizon oil spill in the Northeast Gulf of Mexico, Isabel Romero

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Begomovirus-Associated Satellite DNA Diversity Captured Through Vector-Enabled Metagenomic (VEM) Surveys Using Whiteflies (Aleyrodidae), Karyna Rosario, Christian Marr, Arvind Varsani, Simona Kraberger, Daisy Stainton, Enrique Moriones, Jane E Polston, and Mya Breitbart

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Employing Extant Stable Carbon Isotope Data in Gulf of Mexico Sedimentary Organic Matter for Oil Spill Studies, Brad E. Rosenheim, Matthew A. Pendergraft, George C. Flowers, Robert Carney, José L. Sericano, Jeff Chanton, Zeynep Dincer, and Terry L. Wade

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Towards quantitative viromics for both double-stranded and single-stranded DNA viruses., Simon Roux, Natalie E Solonenko, Vinh T Dang, Bonnie T Poulos, Sarah M Schwenck, Dawn B Goldsmith, Maureen L Coleman, Mya Breitbart, and Matthew B Sullivan

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Linking Oceanographic Modeling and Benthic Mapping with Habitat Suitability Models for Pink Shrimp on the West Florida Shelf, Peter J. Rubec, Jesse Lewis, David Reed, Christi Santi, Robert H. Weisberg, Lianyuan Zheng, Chris Jenkins, Charles F. Ashbaugh, Curt Lashley, and Salvatore Versaggi

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Benthic Foraminifera Abundance, Stable Isotopes, Desoto Canyon Sediments, 2010-2012, Patrick Schwing

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Quantification of Boat Visitation Rates at Artificial and Natural Reefs in the Eastern Gulf of Mexico Using Acoustic Recorders, Peter Simard, Kara R. Wall, David A. Mann, Carrie C. Wall, and Christopher D. Stallings

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Clumped Isotope Composition of Cold-water Corals: A Role for Vital Effects?, Peter T. Spooner, Weifo Guo, Laura F. Robinson, Nivedita Thiagarajan, Katharine R. Hendry, Brad E. Rosenheim, and Melanie J. Leng

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Temporal Variability of Diapycnal Mixing in the Northern South China Sea, Hui Sun, Qingxuan Yang, Wei Zhao, Xinfeng Liang, and Jiwei Tian

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Characterization of Available Light for Seagrass and Patch Reef Productivity in Sugarloaf Key, Lower Florida Keys, Gerardo Toro-Farmer, Frank E. Muller-Karger, Maria Vega-Rodriguez, Nelson Melo, Kimberly Yates, Sergio Cerdeira-Estrada, and Stanley R. Herwitz

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Recent Change - North Sea, Thomas Wahl

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Climate Controls Multidecadal Variability in U. S. Extreme Sea Level Records, Thomas Wahl and Don P. Chambers

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Impacts of Combined Overfishing and Oil Spills on the Plankton Trophodynamics of the West Florida Shelf Over the Last Half Century of 1965-2011: a Two-Dimensional Simulation Analysis of Biotic State Transitions, from a Zooplankton- to a Bacterioplankton-Modulated Ecosystem, John J. Walsh, Jason M. Lenes, Brian P. Darrow, Ashley A. Parks, and Robert H. Weisberg

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West Florida Shelf Upwelling: Origins and Pathways, Robert H. Weisberg, Lianyuan Zheng, and Yonggang Liu

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Karenia Brevis Blooms on the West Florida Shelf: A Comparative Study of the Robust 2012 Bloom and the Nearly Null 2013 Event, Robert H. Weisberg, Lianyuan Zheng, Yonggang Liu, Alina A. Corcoran, Chad Lembke, Chuanmin Hu, Jason M. Lenes, and John J. Walsh

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Did Deepwater Horizon Hydrocarbons Transit to the West Florida Continental Shelf?, Robert H. Weisberg, Lianyuan Zheng, Yonggang Liu, Steven Murawski, Chuanmin Hu, and John Paul

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Processes of Multibathyal Aragonite Undersaturation in the Arctic Ocean, Jonathan G. Wynn, Lisa Robbins, and L. G. Anderson

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Recent Increases in Arctic Freshwater Flux Affects Labrador Sea Convection and Atlantic Overturning Circulation, Qian Yang, Tim Dixon, Paul G. Myers, Jennifer Bonin, Don Chambers, M.R. van den Broeke, Mads H. Ribergaard, and John Mortensen

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Patterns of Transcript Abundance of Eukaryotic Biogeochemically-Relevant Genes in the Amazon River Plume, Brian L. Zielinski, Andrew E. Allen, Edward J. Carpenter, Victoria J. Coles, Byron C. Crump, Mary Doherty, Rachel A. Foster, Joaquim I. Goes, Helga R. Gomes, Raleigh R. Hood, John P. McCrow, Joseph P. Montoya, Ahmed Moustafa, Brandon M. Satinsky, Shalabh Sharma, Christa B. Smith, Patricia L. Yager, and John H Paul

Submissions from 2015

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Stochastic Lagrangian Trajectory Modeling of Surface Drifters Deployed during the Deepwater Horizon Oil Spill, Ana J. Abascal, Sonia Castanedo, R. Minguez, Raul Medina, Yonggang Liu, and Robert H. Weisberg

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Biogeochemical Cycling of Cadmium Isotopes along a High-Resolution Section through the North Atlantic Ocean, Tim M. Conway and Seth G. John

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The Cycling of Iron, Zinc and Cadmium in the North East Pacific Ocean – Insights from Stable Isotopes, Tim M. Conway and Seth G. John

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Constraints on Soluble Aerosol Iron Flux to the Southern Ocean at the Last Glacial Maximum, Tim M. Conway, E. W. Wolff, R. Röthlisberger, R. Mulvaney, and H. E. Elderfield

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Nutrient concentrations for the northeastern Gulf of Mexico and west Florida shelf: June 2012 – August 2014, Kendra L. Daly

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Partitioning of Dissolved Iron and Iron Isotopes into Soluble and Colloidal Phases along the GA03 GEOTRACES North Atlantic Transect, Jessica N. Fitzsimmons, Gonzalo G. Carrasco, Jingfeng Wu, Saeed Roshan, Mariko Hatta, Christopher I. Measures, Tim M. Conway, Seth G. John, and Edward A. Boyle

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Coastal Ocean Forecasting: Science Foundation and User Benefits, V. H. Kourafalou, P. De Mey, J. Staneva, N. Ayoub, A. Barth, and Robert H. Weisberg

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Coastal Ocean Observing Systems, Yonggang Liu, Heather Kerkering, and Robert H. Weisberg

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Introduction to Coastal Ocean Observing Systems, Yonggang Liu, Heather Kerkering, and Robert H. Weisberg

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Glider Salinity Correction for Unpumped Ctd Sensors across a Sharp Thermocline, Yonggang Liu, Robert H. Weisberg, and Chad Lembke

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Effect of Radio Frequency Interference (RFI) Noise Energy on WERA Performance Using the "Listen Before Talk" Adaptive Noise Procedure on the West Florida Shelf, Clifford R. Merz, Yonggang Liu, Klaus-Werner Gurgel, Leif Peterson, and Robert H. Weisberg

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Intercomparison of Dissolved Trace Elements at the Bermuda Atlantic Time Series Station, R. Middag, R. Séférian, Tim M. Conway, Seth G. John, K. W. Bruland, and H. J. W. de Baar

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The Isotopic Signature and Distribution of Particulate Iron in the North Atlantic Ocean, Brandi N. Revels, Daniel C. Ohnemus, Phoebe J. Lam, Tim M. Conway, and Seth G. John

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Strategic Assessment of Fisheries Independent Monitoring Programs in the Gulf of Mexico, Paul Mark Suprenand, Michael Drexler, David L. Jones, and Cameron H. Ainsworth

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The GEOTRACES Intermediate Data Product 2014, The GEOTRACES Group and Tim M. Conway

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A Simulation Analysis of the Plankton Fate of the Deepwater Horizon Oil Spills, John J. Walsh, Jason M. Lenes, Brian P. Darrow, Ashley A. Parks, Robert H. Weisberg, Lianyuan Zheng, and Chuanmin Hu

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Basic Tenets for Coastal Ocean Ecosystems Monitoring, Robert H. Weisberg, Lianyuan Zheng, and Yonggang Liu

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Influences of Channel Deepening and Widening on the Tidal and Nontidal Circulations of Tampa Bay, Jun Zhu, Robert H. Weisberg, Lianyuan Zheng, and Shuzong Han

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On the Flushing of Tampa Bay, Jun Zhu, Robert H. Weisberg, Lianyuan Zheng, and Shuzong Han

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On the Salt Balance of Tampa Bay, Jun Zhu, Robert H. Weisberg, Lianyuan Zheng, and Hongshuai Qi

Submissions from 2014

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Florida Gulf Bay Scallop (Argopecten Irradians Concentricus) Population Genetic Structure: Form, Variation, and Influential Factors, Theresa M. Bert, William S. Arnold, Ami E. Wilbur, Seifu Seyoum, Anne L. McMillen-Jackson, Sarah P. Stephenson, Robert H. Weisberg, and Laura A. Yarbro