Marine Science Faculty Publications
Submissions from 2018
The Gut Virome of the Protochordate Model Organism, Ciona intestinalis Subtype A, Brittany Leigh, Anni Djurhuus, Mya Breitbart, and Larry Dishaw
Using Three Acoustic Technologies on Underwater Gliders to Survey Fish, Chad Lembke, Susan Lowerre-Barbieri, David Mann, and Christopher J. Taylor
Utilizing Gliders and Acoustics to Identify Fish Habitat Hotspots, Chad Lembke, David Mann, Chris Taylor, Alex Silverman, and Edmund Hughes
Bacteriohopanetetrol and bacteriohopanetetrol II in a southern Gulf of Mexico sediment core, August 2015, Sara Lincoln and Katherine Freeman
Evaluation of Satellite-Derived SST Products in Identifying the Rapid Temperature Drop on the West Florida Shelf Associated with Hurricane Irma, Yonggang Liu, Robert H. Weisberg, Jason Law, and Boyin Huang
Assessment of Offshore Oil/gas Platform Status in the Northern Gulf of Mexico Using Multi-source Satellite Time-series Images, Yongxue Liu, Chuanmin Hu, Chao Sun, Wenfeng Zhan, Shaojie Sun, Bihua Xu, and Yanzhu Dong
Identifying Industrial Heat Sources Using Time-series of the VIIRS Nightfire Product with an Object-oriented Approach, Yongxue Liu, Chuanmin Hu, Wenfeng Zhan, Chao Sun, Brock Murch, and Lei Ma
Incorporation of Acoustic Sensors on a Coastal Ocean Monitoring Platform for Measurements of Biological Activity, James Locascio, David Mann, Kyle Wilcox, and Mark Luther
Long-term Spatiotemporal Variability of Southwest Florida Whiting Events from MODIS Observations, Jacqueline S. Long, Chuanmin Hu, and Mengqiu Wang
Real Time Observations of Oceanographic and Meteorological Parameters for Maritime Transportation: Origins and Novel Applications, Mark E. Luther, Steven D. Meyers, and Jeffrey Scudder
A Conceptual View on Inertial Internal Waves in Relation to the Subinertial Flow on the Central West Florida Shelf, Ekatrina V. Maksimova
The METROPOLE Project – An Integrated Framework to Analyse Local Decision Making and Adaptive Capacity to Large-Scale Environmental Change: Decision Making and Adaptation to Sea Level Rise in Santos, Brazil, José A. Marengo, Frank E. Muller-Karger, Mark Pelling, and Catherine J. Reynolds
Benthic Foraminifera as Bioindicators of Potentially Toxic Element (Pte) Pollution: Torrecillas Lagoon (San Juan Bay Estuary), Puerto Rico, Michael Martínez-Colón, Pamela Hallock, Carlos R. Green-Ruíz, and Joseph M. Smoak
Interspecific Interactions May Influence Reef Fish Management Strategies in the Gulf of Mexico, Michelle D. Masi, Cameron H. Ainsworth, I. C. Kaplan, and M. J. Schirripa
Rapid Coastal Forest Decline in Florida's Big Bend, Matthew J. McCarthy, Benjamin Dimmitt, and Frank E. Muller-Karger
Impacts of 40 Years of Land Cover Change on Water Quality in Tampa Bay, Florida, Matthew J. McCarthy, Frank E. Muller-Karger, Daniel Otis, and Pablo Méndez-Lázaro
Water Quality Drivers in 11 Gulf of Mexico Estuaries, Matthew J. McCarthy, Daniel Otis, Pablo Méndez-Lázaro, and Frank Muller-Karger
Enabling Efficient, Large-Scale High-Spatial Resolution Wetland Mapping using Satellites, Matthew J. McCarthy, Kara R. Radabaugh, Ryan P. Moyer, and Frank Muller-Karger
Developing Community-Based Scientific Priorities and New Drilling Proposals in the Southern Indian and Southwestern Pacific Oceans, Robert McKay, Neville Exon, Dietmar Müller, Karsten Gohl, Michael Gurnis, Amelia E. Shevenell, Stuart Henrys, Fumio Inagaki, Dhananjai Pandey, and Jessica Whiteside
Decreased Growth and Increased Shell Disease in Early Benthic Phase Homarus Americanus in Response to Elevated CO2, Erin L. McLean, Natallia V. Katenka, and Brad A. Seibel
The Biogeochemical Cycling of Iron, Copper, Nickel, Cadmium, Manganese, Cobalt, Lead, and Scandium in a California Current Experimental Study, Travis Mellett, Matthew T. Brown, P. Dreux Chappell, Carolyn Duckham Carolyn Duckham, Jessica N. Fitzsimmons, Claire P. Till, Robert M. Sherrell, Maria T. Maldonado, and Kristen N. Buck
Photochemical Efficiencies of Diatom Symbionts in Hospite in Amphistegina Gibbosa (foraminifera) Across Seasons in the Florida Keys, Usa, Natasha Mendez-Ferrer, Pamela Hallock, and David L. Jones
A Heat Vulnerability Index to Improve Urban Public Health Management in San Juan, Puerto Rico, P. Méndez-Lázaro, Frank E. Muller-Karger, Daniel B. Otis, M. J. McCarthy, and E. Rodríguez
Who Should Pay for Climate Adaptation? Public Attitudes and the Financing of Flood Protection in Florida, Samuel Merrill, Jack Kartez, Karen Langbehn, Frank E. Muller-Karger, and Catherine J. Reynolds
Wakes from Large Vessels and the Risk to the Shoreline Environment in Tampa Bay, Steven D. Meyers, Mark E. Luther, Gary Raulerson, Ed Sherwood, Stephanie Ringuet, Katie Conrad, and Gian Basili
Meta-analysis of Gulf of Mexico Macrofauna Data from 1983-11-26 to 2015-08-09, Paul Montagna
Meta-analysis of Gulf of Mexico Meiofauna data from 1983-11-26 to 2015-08-06, Paul Montagna
Salinity Induction of Recycling Crassulacean Acid Metabolism and Salt Tolerance in Plants of Talinum triangulare, Estefanía Montero, Ana Marta Francisco, Enrique Montes, and Ana Herrera
Genomic Evolution, Recombination, and Inter-strain Diversity of Chelonid Alphaherpesvirus 5 From Florida and Hawaii Green Sea Turtles with Fibropapillomatosis, Cheryl Morrison, Luke Iwanowicz, Thierry Work, Elizabeth Fahsbender, Mya Breitbart, Cynthia Adams, Deb Iwanowicz, Lakyn Sanders, Mathias Ackermann, and Robert Cornman
Essential Ocean Variables for Global Sustained Observations of Biodiversity and Ecosystem Changes, Frank E. Muller-Karger
Satellite Sensor Requirements for Monitoring Essential Biodiversity Variables of Coastal Ecosystems, Frank E. Muller-Karger
Linking Capacity Development to GOOS Monitoring Networks to Achieve Sustained Ocean Observation, Frank E. Muller-Karger
Advancing Marine Biological Observations and Data Requirements of the Complementary Essential Ocean Variables (Eovs) and Essential Biodiversity Variables (Ebvs) Frameworks, Frank E. Muller-Karger and Enrique Montes
Catch Data from Fish Collected throughout the Gulf of Mexico from 2011 until 2017, Steven A. Murawski
Comparative Abundance, Species Composition, and Demographics of Continental Shelf Fish Assemblages throughout the Gulf of Mexico, Steven A. Murawski, Ernst B. Peebles, Adolfo Gracia, and John W. Tunnell Jr.
Closing the Knowledge Gap for Ultra Deep Blowouts: Foci of the C-IMAGE Research Consortium, Steven Murawski and Gilbert Gilbert
Mapping of Benthic Habitats in Komave, Coral Coast Using Worldview-2 Satellite Imagery, R. Naidu, Frank E. Muller-Karger, and M. McCarthy
Subtropical Hydroclimate during Termination V (∼430-422 ka): Annual Records of Extreme Precipitation, Drought, and Interannual Variability from Santa Barbara Basin, Tiffany J. Napier, Ingrid L. Hendy, Linda A. Hinnov, Erik T. Brown, and Amelia E. Shevenell
Ecosystem Models of Lake Victoria (East Africa): Exploring the Sensitivity of Ecosystem Effects of Fishing to Model Choice, Vianny Natugonza, Cameron Ainsworth, Erla Sturludóttir, Laban Musinguzi, Richard Ogutu-Ohwayo, Tumi Tomasson, Chrisphine Nyamweya, and Gunnar Stefansson
Climate-Change–driven Accelerated Sea-level Rise Detected in the Altimeter Era, R. S. Nerem, B. D. Beckley, J. T. Fasullo, B. D. Hamlinigton, D. Masters, and Gary T. Mitchum
Ocean Futures Under Ocean Acidification, Marine Protection, and Changing Fishing Pressures Explored Using a Worldwide Suite of Ecosystem Models, Erik Olsen, Isaac C. Kaplan, Cameron Ainsworth, Gavin Fay, Sarah Gaichas, Robert Gamble, Raphael Girardin, Cecilie H. Eide, and Thomas F. Ihde
Ocean Futures Under Ocean Acidification, Marine Protection, and Changing Fishing Pressures Explored Using a Worldwide Suite of Ecosystem Models, Erik Olsen, Isaac C. Kaplan, Cameron Ainsworth, Gavin Fay, Sarah Gaichas, Robert Gamble, Raphael Girardin, Cecilie H. Eide, Thomas F. Ihde, Hem Nalini Morzaria-Luna, Kelli F. Johnson, Marie Savina-Rolland, Howard Townsend, Mariska Weijerman, Elizabeth A. Fulton, and Jason S. Link
Tracking total bacterial abundances and Alcanivorax specific abundances with qPCR in Pensacola Beach, June 2010 to June 2011, Will A. Overholt
Benthic microbial community composition across the northern and southern Gulf of Mexico, 2012-2015, Will A. Overholt and Joel E. Kostka
Animations of the oil concentrations and the 3-D structure of the oil plume, numerical results from the far-field modeling of the Deepwater Horizon 2010 oil spill using a Connectivity Modeling System, Natalie Perlin and Claire B. Paris-Limouzy
Three-dimensional daily oil concentrations and oil mass estimates in the Gulf of Mexico from the modeling of the Deepwater Horizon 2010 oil spill using a Connectivity Modeling System, Natalie Perlin and Claire B. Paris-Limouzy
Particle size distributions under high pressure: Methane bubble size distributions, Simeon Pesch and Michael Schlüter
Oceanographic and Climatic Evolution of the Southeastern Subtropical Atlantic over the last 3.5 Ma, Benjamin Petrick, Erin L. McClymont, Kate Littler, Antoni Rosell-Melé, Matthew O. Clarkson, Mark Maslin, Ursula Röhl, Amelia E. Shevenell, and Richard D. Pancost
Size-dependent Predation and Intraspecific Inhibition of an Estuarine Snail Feeding on Oysters, Timothy J. Pusack, J. Wilson White, Hanna G. Tillotson, David L. Kimbro, and Christopher D. Stallings
Simulating Transport Pathways of Pelagic Sargassum from the Equatorial Atlantic into the Caribbean Sea, Nathan F. Putman, Gustavo J. Goni, Lewis J. Gramer, Chuanmin Hu, Elizabeth M. Johns, Joaquin Trinanes, and Mengqiu Wang
Diurnal Changes of cyanobacteria Blooms in Taihu Lake as derived from GOCI Observations, Lin Qi, Chuanmin Hu, Petra M. Visser, and Ronghua Ma
Environmental Controls on the Geochemistry of Globorotalia truncatulinoides in the Gulf of Mexico: Implications for Paleoceanographic Reconstructions, Caitlin E. Reynolds, Julie N. Richey, Jennifer S. Fehrenbacher, Brad E. Rosenheim, and Howard J. Spero
Spatial and Temporal Variability of pCO2, Carbon Fluxes, and Saturation State on the West Florida Shelf, Lisa L. Robbins, Kendra L. Daly, L. Barbero, R. Wanninkhof, R. He, H. Zong, J. T. Lisle, W. J. Cai, and C. G. Smith
Regional Acidification Trends in Florida Shellfish Estuaries: a 20+ Year Look at pH, Oxygen, Temperature, and Salinity, Lisa L. Robbins and John T. Lisle
Spatial and Temporal Variability of pCO2, Carbon Fluxes, and Saturation State on the West Florida Shelf, L. L. Robbins, Kendra L. Daly, L. Barbero, R. Wanninkhof, R. He, H. Zong, J. T. Lisle, W. J. Cai, and C. G. Smith
Decadal Assessment of Polycyclic Aromatic Hydrocarbons in Mesopelagic Fishes from the Gulf of Mexico Reveals Exposure to Oil-Derived Sources, Isabel Romero, Tracey Sutton, Brigid Carr, Ester Quintana-Rizzo, Steve W. Ross, David Hollander, and Joseph J. Torres
Near-Complete Genome Sequence of a Novel Single-Stranded RNA Virus Discovered in Indoor Air, Karyna Rosario, Noah Fierer, and Mya Breitbart
Diversity of DNA and RNA Viruses in Indoor Air As Assessed via Metagenomic Sequencing, Karyna Rosario, Noah Fierer, Shelly Miller, Julia Luongo, and Mya Breitbart
Challenges in Using Celltracker Green on Foraminifers that Host Algal Endosymbionts, Benjamin J. Ross and Pamela Hallock
Submerged Reef Terraces in the Maldivian Archipelago (Indian Ocean), Alessio Rovere, Pankaj Khanna, Carlo Nike Bianchi, André W. Droxler, Carla Morri, and David F. Naar
Description and Mechanisms of the Mid-Year Upwelling in the Southern Caribbean Sea from Remote Sensing and Local Data, Digna T. Rueda-Roa, Tal Ezer, and Frank E. Muller-Karger
Description and Mechanisms of the Mid-Year Upwelling in the Southern Caribbean Sea from Remote Sensing and Local Data, Digna T. Rueda-Roa, Tal Ezer, and Frank E. Muller-Karger
The GEOTRACES Intermediate Data Product 2017, Reiner Schlitzer, Robert F. Anderson, Elena Dodas, Maeve Lohan, Walter Geibert, Alessandro Tagliabue, Kristen N. Buck, Tim Conway, Stephen Galer, and Ruifang Xie
Interfacial tension between artificial seawater and methane, Michael Schluter, Katrin Laqua, and Simeon Pesch
Interfacial tension between Louisiana Sweet Crude oil and artificial seawater, Michael Schluter, Katrin Laqua, and Simeon Pesch
Interfacial tension between Louisiana Sweet Crude oil and methane, Michael Schluter, Katrin Laqua, and Simeon Pesch
Density of methane-saturated Louisiana Sweet Crude oil at 20 °C, Michael Schluter and Simeon Pesch
Interfacial tension of methane-saturated Louisiana Sweet Crude oil and artificial seawater at 20 degrees Celsius, Michael Schluter and Simeon Pesch
Viscosity of Louisiana Sweet Crude oil at 35 degrees Celsius at 7 different pressures, Michael Schluter and Simeon Pesch
Tracing the Incorporation of Carbon into Benthic Foraminiferal Calcite Following the Deepwater Horizon Event, Patrick Schwing, Jeffrey P. Chanton, Isabel C. Romero, David Hollander, Ethan A. Goddard, Gregg R. Brooks, and Rebekka A. Larson
Short-lived radioisotope (excess Pb210) measurements from sediment cores collected throughout the Gulf of Mexico from 2010-11-07 to 2017-07-20, Patrick Schwing and David Hollander
Benthic foraminiferal assemblages from sediment cores collected on multiple cruises in the Gulf of Mexico from 2010-11-18 to 2017-05-22, Patrick Schwing and David J. Hollander
Gulf-wide seafloor surface benthic foraminifera stable isotopes from sediment cores collected on multiple cruises from 2010-06-13 to 2017-07-19, Patrick Schwing and David J. Hollander
Wageningen aquaria/microcosm experiments, benthic foraminifera assemblage and stable isotope measurements, Patrick Schwing and David J. Hollander
Resilience of Benthic Foraminifera in the Northern Gulf of Mexico following the Deepwater Horizon Event (2011–2015), Patrick Schwing, Bryan J. O'Malley, and David Hollander
Gulf-wide Impacts, Recovery and Connectivity of Marine Invertebrates in the Context of Oil Spills and Environmental Variability, Patrick Schwing and Yadong Wang
Environmental Petroleum Pollution Analysis Using Ramped Pyrolysis-gas Chromatography–mass Spectrometry, Meredith Evans Seeley, Qing Wang, Hernando Bacosa, Brad E. Rosenheim, and Zhanfei Liu
Metabolic Suppression in the Pelagic Crab, Pleuroncodes planipes, in Oxygen Minimum Zones, Brad A. Seibel, Bryan E. Luu, Shannon N. Tessier, Trisha Towanda, and Kenneth B. Storey
RNA-seq transcriptome characterization of liver, gonad, and head kidney from control and intraperitoneal oil-injected sub-adult male red drum, Tracy Sherwood and Dana Wetzel
Sediment-oil agglomerates in situ incubation in Pensacola Beach sand, Boryoung Shin, Markus Huettel, Max Kolton, and Joel Kostka
Anaerobic degradation of hexadecane and phenanthrene coupled to sulfate reduction in seafloor sediments from the northern Gulf of Mexico, Boryoung Shin, Karsten Zengler, Kuk-Jeong Chin, and Will A Overholt Joel E Kostka
Enabling a Platform for Habitat and Marine Assessment with Real Time Monitoring and Synchronous Databasing, Alex Silverman, Chad Lembke, Steven Butcher, and Steven Murawski
New Species from the Sabrina Flora: An Early Paleogene Pollen and Spore Assemblage from the Sabrina Coast, East Antarctica, Catherine Smith, Sophie Warny, Amelia E. Shevenell, Sean P.S. Gulick, and Amy Leventer
Airborne Bacteria in Earth's Lower Stratosphere Resemble Taxa Detected in the Troposphere: Results From a New NASA Aircraft Bioaerosol Collector (ABC), David J. Smith, Jayamary D. Ravichandar, Sunit Jain, Dale W. Griffin, Hongbin Yu, Qian Tan, James Thissen, Terry Lusby, Patrick Nicoll, and Sarah Shedler
Nearfield Plume Hindcast of the Ixtoc I blowout in the Bay of Campeche from June 1979 to March 1980 using the Texas A&M Oilspill Calculator, Scott Socolofsky and Jonas Gros
In Situ Observations of Foraminiferal Bleaching in the Maldives, Indian Ocean, Silvia Spezzaferri, Akram El Kateb, Chiara Pisapia, and Pamela Hallock
Variable Thermal Stress Tolerance of the Reef-Associated Symbiont-Bearing Foraminifera Amphistegina Linked to Differences in Symbiont Type, Marleen Stuhr, Achim Meyer, Claire E. Reymond, Gita R. Narayan, Vera Rieder, Jörg Rahnenführer, Michal Kucera, Hildegard Westphal, and Christopher A. Muhando
Remote Sensing Assessment of Oil Spills Near a Damaged Platform in the Gulf of Mexico, Shaojie Sun, Chuanmin Hu, Oscar Garcia-Pineda, Vassiliki Kourafalou, Matthieu Le Hénaff, and Yannis Androulidakis
Tracking an Oil Tanker Collision and Spilled Oils in the East China Sea Using Multisensor Day and Night Satellite Imagery, Shaojie Sun, Yingcheng Lu, Mengqiu Wang, and Chuanmin Hu
Ecosystem Model of the Entire Beaufort Sea Marine Ecosystem: A Temporal Tool for Assessing Food-Web Structure and Marine Animal Populations from 1970 to 2014, Paul M. Suprenand, Cameron H. Ainsworth, and Carie Hoover
Ecological and Indigenous Community Impacts of Oil Spill Mortality in Alaskan Marine Ecosystems, Paul M. Suprenand, Carie Hoover, Cameron H. Ainsworth, L. Dornberger, and C. J. Johnson
Pepper mild mottle virus: A Plant Pathogen with a Greater Purpose in (Waste)water Treatment Development and Public Health Management, E. M. Symonds, Karena Nguyen, V. J. Harwood, and Mya Breitbart
Mass balance of the Antarctic Ice Sheet from 1992 to 2017, The IMBIE Team and Jennifer A. Bonin
Sea Level Variability and Change, P. R. Thompson, M. A. Merrifield, E. Leuliette, W. Sweet, D. P. Chambers, B. D. Hamlington, S. Jevrejeva, G. T. Mitchum, R. S. Nerem, and M. J. Widlansky
Western Gulf of Mexico Red Snapper sample collection data, 2017, Tara Topping
A 3,000‐Year Lag between the Geological and Ecological Shutdown of Florida's Coral Reefs, Lauren T. Toth, Isla B. Kuffner, Anastasios Stathakopoulos, and Eugene Shinn
Epifaunal Foraminifera in an Infaunal World: Insights Into the Influence of Heterogeneity on the Benthic Ecology of Oxygen-Poor, Deep-Sea Habitats, Ryan A. Venturelli, Anthony E. Rathburn, Ashley M. Burkett, and Wiebke Ziebis
