This is a select list of works produced by the faculty of the USF College of Marine Science. Materials are included when two conditions are satisfied: 1) the creator approves inclusion and 2) the publisher allows the material to be placed in the repository. Please direct questions or requests to expand the list of materials to Jason Boczar.

Follow

Submissions from 2017

Link

Microbial Source Tracking in Shellfish Harvesting Waters in the Gulf of Nicoya, Costa Rica, Erin M. Symonds, Suzanne Young, M. E. Verbyla, S. M. McQuaig-Ulrich, E. Ross, Juan Jimenez, Valerie J. Harwood, and Mya Breitbart

Link

The Integral Role of Iron in Ocean Biogeochemistry, Alessandro Tagliabue, Andrew R. Bowie, Philip W. Boyd, Kristen N. Buck, Kenneth S. Johnson, and Mak A. Saito

Link

Echosounder for Biological Surveys Using Ocean Gliders, J. Christopher Taylor and Chad Lembke

Link

Mapping the Soundscape Off the SoutheasternUSA by Using Passive Acoustic Glider Technology, Carrie C. Wall, David A. Mann, Chad Lembke, Chris Taylor, Ruoying He, and Todd Kellison

Link

More Surprises in the Global Greenhouse: Human Health Impacts from Recent Toxic Marine Aerosol Formations, Due to Centennial Alterations of World-Wide Coastal Food Webs, John J. Walsh, Jason M. Lenes, Robert H. Weisberg, Lianyuan Zheng, Chuanmin Hu, Kent A. Fanning Ph.D., R. Snyder, and J. Smith

Link

Variability of Tropical Cyclone Rapid Intensification in the North Atlantic and Its Relationship with Climate Variations, Chunzai Wang, Xidong Wang, Robert H. Weisberg, and Michael L. Black

File

Dataset for: Sun glint requirement for the remote detection of surface oil films, Mengqiu Wang

File

Oil extraction Visible Infrared Imaging Radiometer Suite (VIIRS) Imagery, Western Gulf of Mexico 2005-2013, Mengqiu Wang

Link

Photophysiological Tolerance of Algal Symbionts of Archaias Angulatus to Temperature Extremes, Heidi M. K. Waters and Pamela Hallock

PDF

On the Loop Current Penetration into the Gulf of Mexico, Robert H. Weisberg and Yonggang Liu

Link

On the Movement of Deepwater Horizon Oil to Northern Gulf Beaches, Robert H. Weisberg, Lianyuan Zheng, and Yonggang Liu

PDF

Evolving Academic Culture to Meet Societal Needs, Kateryna Wowk, Larry McKinney, Frank E. Muller-Karger, Russell Moll, Susan Avery, Elva Escobar-Briones, David Yoskowitz, and Richard McLaughlin

Submissions from 2016

Link

Temporal Variability of Reactive Iron Over the Gulf of Alaska Shelf, Ana M. Aguilar-Islas, Marie J.M. Séguret, Robert Rember, Kristen N. Buck, Peter Proctor, Calvin W. Mordy, and Nancy B. Kachel

File

Marginal beta probability density functions for predator-prey diet linkages for the Gulf of Mexico fitted using maximum likelihood method, April 2013-May 2015, Cameron Ainsworth

File

Predator-prey diet linkages with error range for the Gulf of Mexico fitted using maximum likelihood method, April 2013- May 2015, Cameron Ainsworth

File

Predator-prey diet linkages with error range for the Gulf of Mexico fitted using maximum likelihood method, Cameron H. Ainsworth

Link

Towable Instrumentation for Use with a Hand-Deployed Remotely Operated Vehicle, Laughlin D. L. Barker, Stacy L. Kim, Benjamin T. Saenz, D. J. Osborne, and Kendra L. Daly

PDF

Island building in the South China Sea: detection of turbidity plumes and artificial islands using Landsat and MODIS data, Brian B. Barnes and Chuanmin Hu

File

Toxicity and Mutagenicity of the Gulf of Mexico Waters during and after the Deepwater Horizon oil spill, July 2010 to August 2012, Jonelle Basso

PDF

The Ferrojan Horse Hypothesis: Iron-Virus Interactions in the Ocean, Chelsea Bonnain, Mya Breitbart, and Kristen N. Buck

Link

Biogeochemical Cycling of Organic Iron-binding Ligands: Insights From GEOTRACES Data in the Atlantic Ocean, Kristen N. Buck, Chelsea Bonnain, and Randelle Bundy

PDF

An Intercomparison of Dissolved Iron Speciation at the Bermuda Atlantic Time-series Study (BATS) Site: Results from GEOTRACES Crossover Station A, Kristen N. Buck, Loes J. A. Gerringa, and Micha J. A. Rijkenberg

PDF

A Compilation of Iron Speciation Data for Open Oceanic Waters, Salvatore Caprara, Kristen N. Buck, Loes J. A. Gerringa, Micha J. A. Rijkenberg, and Damiano Monticelli

PDF

The Growth Response of Two Diatom Species to Atmospheric Dust from the Last Glacial Maximum, Tim M. Conway, Linn J. Hoffmann, Eike Breitbarth, Robert F. Strzepek, and Eric W. Wolff

Link

Intercomparison of Dissolved Iron Isotope Profiles from Reoccupation of three GEOTRACES Stations in the Atlantic Ocean, Tim M. Conway, Seth G. John, and F. Lacan

PDF

Removal of Six Estrogenic Endocrine-Disrupting Compounds (EDCs) from Municipal Wastewater Using Aluminum Electrocoagulation, Monica M. Cook, Erin M. Symonds, Bert Gerber, Armando Hoare, Edward S. Van Vleet, and Mya Breitbart

File

CTD and other environmental data for the northeastern Gulf of Mexico and west Florida shelf: June 2012 – August 2014, Kendra L. Daly

File

Discrete chlorophyll data for the northeastern Gulf of Mexico and west Florida shelf: June 2012 – August 2014, Kendra L. Daly

File

SIPPER plankton and marine snow abundance and distribution data for the northeastern Gulf of Mexico: June 2012 – August 2014, Kendra L. Daly

File

Zooplankton abundance and distribution data for the northeastern Gulf of Mexico and west Florida shelf: June 2012 – August 2014, Kendra L. Daly

File

Zooplankton Biomass on the West Florida Shelf, July 2010 – August 2014, Kendra L. Daly

File

Zooplankton dry weight biomass data for the northeastern Gulf of Mexico and west Florida shelf: June 2012 – August 2014, Kendra L. Daly

PDF

Assessing the Impacts of Oil-associated Marine Snow Formation and Sedimentation during and after the Deepwater Horizon Oil Spill, Kendra L. Daly, Uta Passow, Jeffrey Chanton, and David Hollander

Link

The Foram Stress Index: A New Tool for Environmental Assessment of Soft-Bottom Environments Using Benthic Foraminifera. A Case Study from the Saronikos Gulf, Greece, Eastern Mediterranean, Margarita D. Dimiza, Maria V. Triantaphyllou, Olga Koukousioura, Pamela Hallock, Nomiki Simboura, Aristomenis P. Karageorgis, and Evangelos Papathanasiou

PDF

Gut Immunity in a Protochordate Involves a Secreted Immunoglobulin-type Mediator Binding Host Chitin and Bacteria, Larry J. Dishaw, Brittany Leigh, John P. Cannon, Assunta Liberti, M. Gail Mueller, Diana P. Skapura, Charlotte R. Karrer, Maria R. Pinto, Rosaria De Santis, and Gary W. Litman

Link

Developing a Polycyclic Aromatic Hydrocarbon Exposure Dose-Response Model for Fish Health and Growth, Lindsey N. Dornberger, Cameron Ainsworth, Stephan Gosnell, and Felicia Coleman

File

Spatial distributions of fish and invertebrates in the Gulf of Mexico for 2010-01-01 estimated using a statistical model, Michael Drexler

PDF

Evaluating Climatic Response to External Radiative Forcing during the Late Miocene to Early Pliocene: New Perspectives from Eastern Equatorial Pacific (IODP U1338) and North Atlantic (ODP 982) Locations, Anna J. Drury, Cédric M. John, and Amelia E. Shevenell

PDF

Dissolved Iron and Iron Isotopes in the Southeastern Pacific Ocean, Jessica N. Fitzsimmons, Tim M. Conway, Jong-Mi Lee, Richard Kayser, Kristen M. Thyng, Seth G. John, and Edward A. Boyle

Link

Mega-Scale Glacial Lineations and Grounding-Zone Wedges in Prydz Channel, East Antarctica, Michelle E. Guitard, Amelia E. Shevenell, Caroline Lavoie, and Eugene W. Domack

Link

Bio-Optical Characteristics of a Red Tide Induced by Mesodinium Rubrum in the Cariaco Basin, Venezuela, L. Guzmán, R. Varela, Frank E. Muller-Karger, and Laura Lorenzoni

PDF

Changes in Sediment Redox Conditions Following the BP DWH Blowout Event, D. W. Hastings, Patrick Schwing, G. R. Brooks, R. A. Larson, J. L. Morford, T. Roeder, K. A. Quinn, T. Bartlett, Isabel C. Romero, and David Hollander

PDF

Quantifying Trace Element and Isotope Fluxes at the Ocean-sediment Boundary: A Review., William B. Homoky, Thomas Weber, William M. Berelson, Tim M. Conway, Gideon M. Henderson, Marco van Hulten, Catherine Jeandel, Silke Severmann, and Alessandro Tagliabue

File

Satellite, glider data, and field measurements to study harmful algae on the West Florida Shelf during 2011 and 2012, Chuanmin Hu

Link

Vertical Migration of Karenia brevis in the Northeastern Gulf of Mexico Observed from Glider Measurements, Chuanmin Hu, Brian B. Barnes, Lin Qi, Chad Lembke, and David English

Link

Developing a Smart Semantic Web with Linked Data and Models for Near-Real-Time Monitoring of Red Tides in the Eastern Gulf of Mexico, Chuanmin Hu, Brock Murch, Alina A. Corcoran, Lianyuan Zheng, Brian Burnel B., Robert H. Weisberg, Karen E. Atwood, and Jason M. Lenes

Link

Advection in Polar and Sub-Polar Environments: Impacts on High Latitude Marine Ecosystems, George L. Hunt Jr., Kenneth F. Drinkwater, Kevin Arrigo, Jørgen Berge, Kendra L. Daly, Seth Danielson, Malin Daase, Haakon Hop, Enrique Isla, and Nina Karnovsky

PDF

A Practical Application of Reduced-Copper Antifouling Paint in Marine Biological Research, Andrea S Jerabek, Kara R Wall, and Christopher D Stallings

PDF

Seascapes as a New Vernacular for Pelagic Ocean Monitoring, Management and Conservation, Maria T. Kavanaugh, Matthew J. Oliver, Francisco P. Chavez, Ricardo M. Letelier, Frank E. Muller-Karger, and Scott C. Doney

PDF

Coral-Associated Bacterial Diversity Is Conserved across Two Deep-Sea Anthothela Species, Stephanie N. Lawler, Christina A Kellogg, Scott C. France, Rachel W. Clostio, Sandra D. Brooke, and Steve W. Ross

PDF

Generation of Germ-Free /Ciona intestinalis for Studies of Gut-Microbe Interactions, Brittany A Leigh, Assunta Liberti, and Larry J Dishaw

File

Dataset for: Simulating cell death in the termination of Karenia brevis blooms: Implications for predicting aerosol toxicity vectors to humans, Jason M. Lenes

PDF

Offshore Forcing on the “Pressure Point” of the West Florida Shelf: Anomalous Upwelling and Its Influence on Harmful Algal Blooms, Yonggang Liu, Robert H. Weisberg, Jason M. Lenes, Lianyuan Zheng, Katherine Hubbard, and John J. Walsh

PDF

Patterns of the Loop Current System and Regions of Sea Surface Height Variability in the Eastern Gulf of Mexico Revealed by the Self-Organizing Maps, Yonggang Liu, Robert H. Weisberg, Stefano Vignudelli, and Gary T. Mitchum

PDF

Synchronicity between Ice Retreat and Phytoplankton Bloom in Circum‐Antarctic Polynyas, Yun Li, Rubao Ji, Meibing Jin, and Julienne Stroeve

PDF

Sunlight Induced Chlorophyll fluorescence in the Near-Infrared Spectral Region in Natural Waters: Interpretations of the Narrow Reflectance Peak around 761nm, Yingcheng Lu, Linhai Li, Minwei Zhang, Shaojie Sun, and Chunguang Lv

PDF

Refinement of the Critical Angle Calculation for the Contrast Reversal of Oil Slicks under Sunglint, Yingcheng Lu, Shaojie Sun, Minwei Zhang, Brock Murch, and Chuanmin Hu

Link

Detecting and Quantifying Oil Slick Thickness by Thermal Remote Sensing: A Ground-Based Experiment, Yingcheng Lu, Wenfeng Zhan, and Chuanmin Hu

File

West Florida Shelf beach sediment PAH and dioctyl sodium sulfosuccinate concentrations, microtox luminescence and microscreen mutagenicity data, 2010 to 2013, Lauren D. McDaniel

PDF

Decadal Variability in the Oxygen Inventory of North Atlantic Subtropical Underwater Captured by Sustained, Long-Term Oceanographic Time Series Observations, Enrique Montes, Frank E. Muller-Karger, Andrés Cianca, Michael W. Lomas, Laura Lorenzoni, and Sennai Habtes

Link

Molecular Characterization of Benthic Foraminifera Communities from the Northeastern Gulf of Mexico Shelf and Slope Following the Deepwater Horizon Event, Joseph M. Moss, Chelsea McCurry, Patrick Schwing, Wade H. Jeffrey, Isabel Romero, David Hollander, and Richard A. Snyder

PDF

A Compilation of Global Bio-optical in Situ Data for Ocean-colour Satellite Applications, Frank Muller-Karger

PDF

A Compilation of Global Bio-Optical in Situ Data for Ocean-Colour Satellite Applications, Frank E. Muller-Karger

File

Lesion data from fish collected off Terrebonne Bay, LA to the Dry Tortugas, FL, 2011-2014, Steven Murawski

File

PAH Analysis: Bile PAH metabolite concentrations in longline captured fish, Northern Gulf of Mexico, 2011, Steven Murawski

File

PAH analysis: Muscle and liver PAH concentrations in longline captured fish, Northern Gulf of Mexico, 2011-2013, Steven Murawski

File

PAH Analysis: Red Snapper Bile PAH Metabolite Concentrations, Northern Gulf of Mexico, 2012, Steven Murawski

PDF

How Did the Deepwater Horizon Oil Spill Affect Coastal and Continental Shelf Ecosystems of the Gulf of Mexico?, Steven Murawski, John E. Fleeger, William F. Patterson III, Chuanmin Hu, Kendra L. Daly, Isabel C. Romero, and Gerardo Toro-Farmer

PDF

How Did the Deepwater Horizon Oil Spill Affect Coastal and Continental Shelf Ecosystems of the Gulf of Mexico?, Steven Murawski, John W. Fleeger, William F. Patterson III, Chuanmin Hu, Kendra L. Daly, Isabel Romero, and Gerardo Toro-Farmer

Link

Epibenthic Mobile Invertebrate Diversity Organized by Coral Habitat in Florida, Kristin Netchy, Pamela Hallock, Kathleen S. Lunz, and Kendra L. Daly

Link

Submarine Glacial Landforms on the Cold East Antarctic Margin, P. E. O'Brien, R. Beaman, Laura De Santis, Eugene W. Domack, C. Escutia, P. T. Harris, Amy Leventer, K. McMullen, A. Post, P. G. Quilty, Amelia E. Shevenell, and C. L. Batchelor

Link

The Role of Mississippi River Discharge in Offshore Phytoplankton Blooming in the Northeastern Gulf of Mexico during August 2010, B. S. O'Connor, Frank E. Muller-Karger, R. W. Nero, Chuanmin Hu, and E. B. Peebles

Link

A Space-Borne Visible-Nir Hyperspectral Imager for Coastal Phenology, Steven N. Osterman, Frank E. Muller-Karger, David C. Humm, Matthew W. Noble, Shawn M. Begley, Christopher B. Hersman, Erin L. Hestir, Noam Izenberg, Mary R. Keller, Jeff Lees, Adam S. Magruder, Frank Morgan, Helmut Seifert, and Kim Strohbehn

File

Golden Tilefish tissue and eye-lens stable isotopes and C:N ratios from the Gulf of Mexico, summer 2013, Jenny Fenton Ostroff

Link

Hydrocarbon-Degrading Bacteria Exhibit a Species-Specific Response to Dispersed Oil while Moderating Ecotoxicity., Will A. Overholt, Kala P. Marks, Isabel Romero, David Hollander, Terry W. Snell, and Joel E. Kostka

File

Associations of metal exposure in otoliths with lesion formation in offshore, northeastern Gulf of Mexico fishes collected after the Deepwater Horizon oil spill (2011-2013), Ernst B. Peebles

PDF

Hearing in the Juvenile Green Sea Turtle (Chelonia mydas): A Comparison of Underwater and Aerial Hearing Using Auditory Evoked Potentials, Wendy E D Piniak, David A Mann, Craig A Harms, T Todd Jones, and Scott A Eckert

PDF

Variability of Particle Size Distributions in the Bohai Sea and the Yellow Sea, Zhongfeng Qui, Deyong Sun, Chuanmin Hu, Sengquiang Wang, Lufei Zheng, Yu Huang, and Tian Peng

File

Chemical analysis of sediment and fish species near the Hercules 265 blowout, Gulf of Mexico, 2013, Isabel Romero

File

Hydrocarbons in deep-sea sediments following the 2010 Deepwater Horizon oil spill in the Northeast Gulf of Mexico, Isabel Romero

PDF

Begomovirus-Associated Satellite DNA Diversity Captured Through Vector-Enabled Metagenomic (VEM) Surveys Using Whiteflies (Aleyrodidae), Karyna Rosario, Christian Marr, Arvind Varsani, Simona Kraberger, Daisy Stainton, Enrique Moriones, Jane E Polston, and Mya Breitbart

PDF

Employing Extant Stable Carbon Isotope Data in Gulf of Mexico Sedimentary Organic Matter for Oil Spill Studies, Brad E. Rosenheim, Matthew A. Pendergraft, George C. Flowers, Robert Carney, José L. Sericano, Jeff Chanton, Zeynep Dincer, and Terry L. Wade

Link

Dormancy in the Foraminifera: A Review, Benjamin J. Ross and Pamela Hallock

PDF

Towards quantitative viromics for both double-stranded and single-stranded DNA viruses., Simon Roux, Natalie E Solonenko, Vinh T Dang, Bonnie T Poulos, Sarah M Schwenck, Dawn B Goldsmith, Maureen L Coleman, Mya Breitbart, and Matthew B Sullivan

PDF

Linking Oceanographic Modeling and Benthic Mapping with Habitat Suitability Models for Pink Shrimp on the West Florida Shelf, Peter J. Rubec, Jesse Lewis, David Reed, Christi Santi, Robert H. Weisberg, Lianyuan Zheng, Chris Jenkins, Charles F. Ashbaugh, Curt Lashley, and Salvatore Versaggi

File

Benthic Foraminifera Abundance, Stable Isotopes, Desoto Canyon Sediments, 2010-2012, Patrick Schwing

Link

Using Foraminifera to Assess Benthic Distribution, Impacts and Recovery following Sedimentary Oil Deposition Associated with the DWH and Ixtoc Events, Patrick Schwing, Michael Martinez-Colon, Maria Luisa Machain-Castillo, Isabel C. Romero, Jeff P. Chanton, Bryan J. O'Malley, Erika E Fridrik, Gregg Brooks, David Hastings, Rebekka A. Larson, and David J. Hollander

PDF

Sediment Core Extrusion Method at Millimeter Resolution Using a Calibrated, Threaded-rod, Patrick Schwing, Isabel C. Romero, Rebekka A Larson, Bryan J. O'Malley, Erika E Fridrik, Ethan Goddard, Gregg R Brooks, David Hastings, Brad Rosenheim, David Hollander, Guy Grant, and Jim Mulhollan

Link

Hypoxia Tolerance and Metabolic Suppression in Oxygen Minimum Zone Euphausiids: Implications for Ocean Deoxygenation and Biogeochemical Cycles, Brad A. Seibel, Jillian L. Schneider, Stein Kaartvedt, Karen F. Wishner, and Kendra L. Daly

Link

Drilling and Modeling Studies Expose Antarctica’s Miocene Secrets, Amelia E. Shevenell

PDF

Quantification of Boat Visitation Rates at Artificial and Natural Reefs in the Eastern Gulf of Mexico Using Acoustic Recorders, Peter Simard, Kara R. Wall, David A. Mann, Carrie C. Wall, and Christopher D. Stallings

PDF

Clumped Isotope Composition of Cold-water Corals: A Role for Vital Effects?, Peter T. Spooner, Weifo Guo, Laura F. Robinson, Nivedita Thiagarajan, Katharine R. Hendry, Brad E. Rosenheim, and Melanie J. Leng

PDF

Temporal Variability of Diapycnal Mixing in the Northern South China Sea, Hui Sun, Qingxuan Yang, Wei Zhao, Xinfeng Liang, and Jiwei Tian

PDF

Sun Glint Requirement for the Remote Detection of Surface Oil Films, Shaojie Sun and Chuanmin Hu

Link

Oil Slick Morphology Derived from AVIRIS Measurements of the Deepwater Horizon Oil Spill: Implications for Spatial Resolution Requirements of Remote Sensors, Shaojie Sun, Chuanmin Hu, Lian Feng, Gregg A. Swayze, Jamie Holmes, George Graettinger, Ian MacDonald, Oscar Garcia, and Ira Leifer

Link

Faecal Pollution Along the Southeastern Coast of Florida and Insight into the Use of Pepper Mild Mottle Virus as an Indicator, E. M. Symonds, C. Sinigalliano, M. Gidley, W. Ahmed, S. M. McQuaig‐Ulrich, and Mya Breitbart

Link

Single-stranded DNA Phages: From Early Molecular Biology Tools to Recent Revolutions in Environmental Microbiology, Anna Székely and Mya Breitbart

Link

Progression of a Gulf of Mexico Food Web Supporting Atlantis Ecosystem Model Development, Joseph H. Tarnecki, Amy A. Wallace, James E. Simons, and Cameron Ainsworth

PDF

Characterization of Available Light for Seagrass and Patch Reef Productivity in Sugarloaf Key, Lower Florida Keys, Gerardo Toro-Farmer, Frank E. Muller-Karger, Maria Vega-Rodriguez, Nelson Melo, Kimberly Yates, Sergio Cerdeira-Estrada, and Stanley R. Herwitz

PDF

The Impact of a Barrier Island Loss on Extreme Events in the Tampa Bay, Marius Ulm, Arne Arns, Thomas Wahl, Steven D. Meyers, Mark E. Luther, and Jürgen Jensen