This is a select list of works produced by the faculty of the USF College of Marine Science. Materials are included when two conditions are satisfied: 1) the creator approves inclusion and 2) the publisher allows the material to be placed in the repository. Please direct questions or requests to expand the list of materials to Jason Boczar.

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Submissions from 2008

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Patterns of Upper Layer Circulation Variability in the South China Sea from Satellite Altimetry Using the Self-Organizing Map, Yonggang Liu, Robert H. Weisberg, and Yaochu Yuan

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A Three-Dimensional Biophysical Model of Karenia Brevis Dynamics on the West Florida Shelf: a Look at Physical Transport and Potential Zooplankton Grazing Controls, Scott P. Milroy, Dwight A. Dieterle, Ruoying He, Gary J. Kirkpatrick, Kristen M. Lester, Karen A. Steidinger, Gabriel A. Vargo, John J. Walsh, and Robert H. Weisberg

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In Situ Observations and Satellite Remote Sensing in Seacoos: Program Development and Lessons Learned, James R. Nelson and Robert H. Weisberg

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Seacoos Program Management, Harvey E. Seim, James Nelson, Madilyn Fletcher, C. N. K. Mooers, Lundie Spence, Robert H. Weisberg, Francisco Werner, Sarah M. Smith, and Russ Lea

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High Frequency Radar Observing Systems in SEACOOS: 2002-2007 Lessons Learned, Lynn K. Shay, Harvey E. Seim, David Savidge, Richard Styles, and Robert H. Weisberg

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A Comparison of Near-Surface Current Measurement Methods, Eric Siegel, Dennis A. Mayer, and Robert H. Weisberg

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Estimating Geocenter Variations from a Combination of GRACE and Ocean Model Output, Sean Swenson, D. Chambers, and John Wahr

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Si Cycle in the Cariaco Basin, Venezuela: Seasonal Variability in Silicate Availability and the Si:C:N Composition of Sinking Particles, Robert C. Thunell, Claudia Benitez-Nelson, Frank E. Muller-Karger, Laura Lorenzoni, Mary Scranton, Ramon Varela, Yrene Astor, and Kent A. Fanning

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Waves Initiative Within Seacoos, George Voulgaris, Brian K. Haus, Paul Work, Lynn K. Shay, Harvey E. Seim, Robert H. Weisberg, and James R. Nelson

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Epilogue to SEACOOS, Robert H. Weisberg

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Hurricane Storm Surge Simulations Comparing Three-Dimensional with Two-Dimensional Formulations Based on an Ivan-like Storm over the Tampa Bay, Florida Region, Robert H. Weisberg and Lianyuan Zheng

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Assessing the Globally Averaged Sea Level Budget on Seasonal to Interannual Timescales, Josh K. Willis, D. Chambers, and R Steven Nerem

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GRACE Observes Small-scale Mass Loss in Greenland, B. Wouters, D. Chambers, and E.J. O. Schrama

Submissions from 2007

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Multivariate Reconstruction of Missing Data in Sea Surface Temperature, Chlorophyll, and Wind Satellite Fields, Aida Alvera-Azcarate, Alexander Barth, J. M. Beckers, and Robert H. Weisberg

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Filtering Inertia-Gravity Waves from the Initial Conditions of the Linear Shallow Water Equations, Alexander Barth, Jean-Marie Beckers, Aida Alvera-Azcarate, and Robert H. Weisberg

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Gravimetric Methods – Spacecraft Altimeter Measurements, Don P. Chambers

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Effects of Ice Melting on GRACE Observations of Ocean Mass Trends, Don P. Chambers, Mark E. Tamisiea, R Steven Nerem, and John C. Ries

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Reconstructing Twentieth-Century Sea Surface Temperature Variability in the Southwest Pacific: A Replication Study Using Multiple Coral Sr/Ca Records from New Caledonia, Kristine L. DeLong, Terrence M. Quinn, and Frederick W. Taylor

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Lesion Regeneration Rates in Reef-Building Corals Montastraea spp. as Indicators of Colony Condition, Elizabeth M. Fisher, John E. Fauth, Pamela Hallock-Muller, and Cheryl M. Woodley

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Satellite-Derived Surface Current Divergence in Relation to Tropical Atlantic SST and Wind, Robert W. Helber, Robert H. Weisberg, Fabrice Bonjean, Eric S. Johnson, and Gary S. Lagerloef

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Euphotic Zone Depth: Its Derivation and Implication to Ocean-Color Remote Sensing, ZhongPing Lee, Alan Weidemann, John Kindle, Robert Arnone, Kendall L. Carder, and Curtiss Davis

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Rectification of the Bias in the Wavelet Power Spectrum, Yonggang Liu, X. San Liang, and Robert H. Weisberg

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Ocean Currents and Sea Surface Heights Estimated Across the West Florida Shelf, Yonggang Liu and Robert H. Weisberg

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Current Patterns on the West Florida Shelf from Joint Self-Organizing Map Analyses of Hf Radar and Adcp Data, Yonggang Liu, Robert H. Weisberg, and Lynn K. Shay

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Macroarray Analysis of Gene Expression in a Marine Pseudotemperate Bacteriophage, Amy Long, Stacey S. Patterson, and John H. Paul

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On the Attraction of Larval Fishes to Reef Sounds, David A. Mann, Brandon M. Casper, Kelly S. Boyle, and Timothy C. Tricas

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Velocity Comparisons from Upward and Downward Acoustic Doppler Current Profilers on the West Florida Shelf, Dennis A. Mayer, Jyotika I. Virmani, and Robert H. Weisberg

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Development of a Self-Contained, Satellite Based, Moored Surface Buoy Position Tracking Device, Clifford R. Merz, Robert H. Weisberg, Patrick A. Smith, Jason A. Law, Jeff Donovan, Graham M. Tilbury, Chad Lembke, and Douglass Myhre

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Comment on “Estimating Future Sea Level Change from Past Records” by Nils-Axel Mörner, R. S. Nerem, A. Cazenave, Don Chambers, L. Fu, E. W. Leuliette, and Gary T. Mitchum

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Top-Down Control of Phytoplankton by Oysters in Chesapeake Bay, USA: Reply to Newell et al. (2007), Lawrence R. Pomeroy, Christopher F. D'Elia, and Linda C. Schaffner

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Progressive Dolomitization of Florida Limestone Recorded by Alkaline Earth Element Concentrations in Saline, Geothermal, Submarine Springs, Johan Schijf and Robert H. Byrne

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High-Frequency Radar Mapping of Surface Currents Using Wera, Lynn K. Shay, Jorge Martinez-Pedraja, Thomas M. Cook, Brian K. Haus, and Robert H. Weisberg

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Upper Ocean Response of the Mesoamerican Barrier Reef System to Hurricane Mitch and Coastal Freshwater Inputs: A Study Using Sea-Viewing Wide Field-Of-View Sensor (SEAWIFS) Ocean Color Data and a Nested-Grid Ocean Circulation Model, Jinyu Sheng, Liang Wang, Serge Andrefouet, Chuanmin Hu, Bruce G. Hatcher, Frank E. Muller-Karger, Bjoern Kjerfve, William D. Heyman, and Bo Yang

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Improvements in Data Management Practices Within West Florida Shelf Coastal Ocean Monitoring and Prediction System, Vembu Subramaniam, Jeff Donovan, Jeremy Atkins, Mark E. Luther, and Robert H. Weisberg

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Particulate Organic Carbon Fluxes Along Upwelling-Dominated Continental Margins: Rates and Mechanisms, Robert C. Thunell, Claudia Benitez-Nelson, Ramon Varela, Yrene Astor, and Frank E. Muller-Karger

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A High Resolution Satellite-only GRACE-based Mean Dynamic Topography of the South Atlantic Ocean, Marcio L. Vianna, Viviane V. Menezes, and D. Chambers

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An Optical Model for Heat and Salt Budget Estimation for Shallow Seas, Hari Warrior and Kendall L. Carder

Submissions from 2006

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Cold Event in the South Atlantic Bight During Summer of 2003: Anomalous Hydrographic and Atmospheric Conditions, Alfredo Aretxabaleta, James R. Nelson, Jack O. Blanton, Harvey E. Seim, Francisco E. Werner, John M. Bane, and Robert H. Weisberg

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Evaluation of New GRACE Time-variable Gravity Data over the Ocean, Don P. Chambers

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Observing seasonal Steric Sea Level Variations with GRACE and Satellite Altimetry, Don P. Chambers

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Laurentide Ice Sheet Meltwater and Abrupt Climate Change During the Last Glaciation, Heather W. Hill, Benjamin P. Flower, Terrence M. Quinn, David J. Hollander, and Thomas P. Guilderson

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Gene Diversity and Organization in rbcL-Containing Genome Fragments from Uncultivated Synechococcus in the Gulf of Mexico, David E. John, Boris Wawrik, F. Robert Tabita, and John H. Paul

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Sea Surface Temperature Patterns on the West Florida Shelf Using Growing Hierarchical Self-Organizing Maps, Yonggang Liu, Robert H. Weisberg, and Ruoying He

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Performance Evaluation of the Self-Organizing Map for Feature Extraction, Yonggang Liu, Robert H. Weisberg, and Christopher N. K. Mooers

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Subcentennial-Scale Climatic and Hydrologic Variability in the Gulf of Mexico During the Early Holocene, Jenna M. LoDico, Benjamin P. Flower, and Terrence M. Quinn

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Temperate and Lytic Cyanophages from the Gulf of Mexico, Lauren D. McDaniel, Michele delaRosa, and John H. Paul

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Limits to Top-Down Control of Phytoplankton by Oysters in Chesapeake Bay, Lawrence R. Pomeroy, Christopher F. D'Elia, and Linda C. Schaffner

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Coral-Based Climate Variability in the Western Pacific Warm Pool since 1867, Terrence M. Quinn, Frederick W. Taylor, and Thomas J. Crowley

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Global Ocean Warming and Sea Level Rise, D. Roemmich, J. Willis, J. Gilson, D. Stammer, A. Koehl, T. Yemenis, Don P. Chambers, Felix Landerer, Jochem Marotzke, Jonathan Gregory, Tatsuo Suzuki, John Church, Neil White, Catia Domingues, Anny Cazenave, and Pierre-Yves Letraon

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Feeding Ecology and Metabolism of the Antarctic Cydippid Ctenophore Callianira Antarctica, Kerri M. Scolardi, Kendra L. Daly, Evgeny A. Pakhomov, and Joseph J. Torres

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Reproducibility of Geochemical and Climatic Signals in the Atlantic Coral Montastraea Faveolata, Jennifer M. Smith, Terrence M. Quinn, Kevin P. Helmle, and Robert B. Halley

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The 2005 Hurricane Season: An Echo of the Past or a Harbinger of the Future?, Jyotika I. Virmani and Robert H. Weisberg

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The 2005 Hurricane Season: an Echo of the Past or a Harbinger of the Future?, Jyotika I. Virmani and Robert H. Weisberg

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Red Tides in the Gulf of Mexico: Where, When, and Why?, John J. Walsh, J. K. Jolliff, B. P. Darrow, J. M. Lenes, S. P. Milroy, A. Remsen, D. A. Dieterle, Kendall L. Carder, F. R. Chen, Gabriel A. Vargo, Robert H. Weisberg, Kent A. Fanning, Eugene Shinn, K. A. Steidinger, Cynthia A. Heil, C. R. Tomas, J. S. Prospero, T. N. Lee, G. J. Kirkpatrick, T. E. Whitledge, D. A. Stockwell, T. A. Villareal, A. E. Jochens, P. S. Bontempi, and Frank E. Muller-Karger

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A Simulation of the Hurricane Charley Storm Surge and its Breach of North Captiva Island, Robert H. Weisberg and Lianyuan Zheng

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Circulation of Tampa Bay Driven by Buoyancy, Tides, and Winds, as Simulated Using a Finite Volume Coastal Ocean Model, Robert H. Weisberg and Lianyuan Zheng

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Hurricane Storm Surge Simulations for Tampa Bay, Robert H. Weisberg and Lianyuan Zheng

Submissions from 2005

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Interannual and Decadal Variability of the Western Pacific Sea Surface Condition for the Years 1787-2000: Reconstruction Based on Stable Isotope Record from a Guam Coral, Ryuji Asami, Tsutomu Yamada, Yasufumi Iryu, Terrence M. Quinn, Christopher P. Meyer, and Gustav Paulay

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COMPS, SEACOOS and Near-Shore Waves, Rick Cole, Neil Trenaman, Robert H. Weisberg, and Kevin Amundsen

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Auditory Sensitivity of Sergeant Major Damselfish Abudefduf saxatilis from Post-Settlement Juvenile to Adult, Sarah A. Egner and David A. Mann

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Interannual Temperature Variability in the Tropical Pacific and Lagrangian Heat Transport Pathways, C. L. Holland and Gary T. Mitchum

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Mississippi River Water in the Florida Straits and in the Gulf Stream Off Georgia in Summer 2004, Chuanmin Hu, James R. Nelson, Elizabeth Johns, Zhiqiang Chen, Robert H. Weisberg, and Frank E. Muller-Karger

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Reduced Horizontal Sea Surface Temperature Gradients under Conditions of Clear Skies and Weak Winds, Kristina B. Katsaros, Alexander Soloviev, Robert H. Weisberg, and Mark E. Luther

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Diffuse Attenuation Coefficient of Downwelling Irradiance: An Evaluation of Remote Sensing Methods, ZhongPing Lee, Miroslaw Darecki, Kendall L. Carder, Curtiss O. Davis, Dariusz Stramski, and W. Joseph Rhea

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Momentum Balance Diagnoses for the West Florida Shelf, Yonggang Liu and Robert H. Weisberg

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Patterns of Ocean Current Variability on the West Florida Shelf Using the Self-Organizing Map, Yonggang Liu and Robert H. Weisberg

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GGM02 - An Improved Earth Gravity Field Model from GRACE, B. D. Tapley, J. C. Ries, S. Bettadpur, Don P. Chambers, M. Cheng, F. Condi, B. Gunter, Z. Kang, P. Nagel, R. Pastor, T. Pekker, S. Poole, and F. Wang

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Relative Humidity Over the West Florida Continental Shelf, Jyotika I. Virmani and Robert H. Weisberg

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West Florida Shelf Circulation on Synoptic, Seasonal, and Interannual Time Scales, Robert H. Weisberg, Ruoying He, Yonggang Liu, and Jyotika I. Virmani

Submissions from 2004

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Use of In Situ and Airborne Reflectance for Scaling-Up Spectral Discrimination of Coral Reef Macroalgae from Species to Communities, Serge Andrefouet, Claude Payri, Eric J. Hochberg, Chuanmin Hu, Marlin J. Atkinson, and Frank E. Muller-Karger

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Preliminary Observations of Global Ocean Mass Variations with GRACE, D. Chambers, J. Wahr, and R Steven Nerem

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Evidence for Dissolved Organic Nitrogen and Phosphorus Uptake During a Cyanobacterial Bloom in Florida Bay, P. M. Glibert, Cynthia A. Heil, David J. Hollander, M. Revilla, A. Hoare, J. Alexander, and S. Murasko

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Generation, Transport, and Preservation of the Alkenone-Based U37K' Sea Surface Temperature Index in the Water Column and Sediments of the Cariaco Basin (Venezuela), Miguel A. Goni, Mark P. Woodworth, Heather L. Aceves, Robert C. Thunell, Eric Tappa, David Black, Frank E. Muller-Karger, Yrene Astor, and Ramon Varela

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Coastal Ocean Wind Fields Gauged against the Performance of an Ocean Circulation Model, Ruoying He, Yonggang Liu, and Robert H. Weisberg

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Current and Thermal Variations to Westerly Wind Bursts in the Equatorial Pacific Ocean, Ying Jang Yang, Tswen Yung Tang, and Robert H. Weisberg

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El Nino Southern Oscillation-Related Salinity Variations Recorded in the Skeletal Geochemistry of a Porites Coral from Espiritu Santo, Vanuatu, K. H. Kilbourne, Terrence M. Quinn, Frederick W. Taylor, Thierry Delcroix, and Yves Gouriou

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A Fossil Coral Perspective on Western Tropical Pacific Climate Similar to 350 Ka, K. H. Kilbourne, Terrence M. Quinn, and F. W. Taylor

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Stability of North Atlantic Water Masses in Face of Pronounced Climate Variability During the Pleistocene, M. E. Raymo, D. W. Oppo, Benjamin P. Flower, D. A. Hodell, J. F. McManus, K. A. Venz, K. F. Kleiven, and K. McIntyre

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Nitrogen Isotope Dynamics of the Cariaco Basin, Venezuela, Robert C. Thunell, Daniel M. Sigman, Frank E. Muller-Karger, Yrene Astor, and Ramon Varela

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Decadal Shifts in Biophysical Forcing of Arctic Marine Food Webs: Numerical Consequences, John J. Walsh, Dwight A. Dieterle, Wieslaw Maslowski, and Terry E. Whitledge

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Phytoplankton Community Structure and Productivity Along the Axis of the Mississippi River Plume in Oligotrophic Gulf of Mexico Waters, Boris Wawrik and John H. Paul

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High Rates of Ammonium Recycling Drive Phytoplankton Productivity in the Offshore Mississippi River Plume, Boris Wawrik, John H. Paul, Deborah A. Bronk, David John, and Mike Gray

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Coastal Ocean Circulation Influences on Remotely Sensed Optical Properties: a West Florida Shelf Case Study, Robert H. Weisberg, Ruoying He, Gary J. Kirkpatrick, Frank E. Muller-Karger, and John J. Walsh

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Nutrient Stimulation of Lytic Phage Production in Bacterial Populations of the Gulf of Mexico, S. J. Williamson and John H. Paul

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Tide, Bouyancy, and Wind-Driven Circulation of the Charlotte Harbor Estuary: A Model Study, Lianyuan Zheng and Robert H. Weisberg

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Tide, Buoyancy, and Wind-Driven Circulation of the Charlotte Harbor Estuary: A Model Study, Lianyuan Zheng and Robert H. Weisberg

Submissions from 2003

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Calibration and Verification of Jason-1 Using Global Along-Track Residuals with TOPEX, Don Chambers, J. C. Ries, and T. J. Urban

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Calibration and Verification of Jason-1 Using Global Along-Track Residuals with TOPEX Special Issue: Jason-1 Calibration/Validation, Don Chambers, J. C. Ries, and T. J. Urban

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Ocean Observer Study: A Proposed National Asset to Augment the Future U. S. Operational Satellite System, John D. Cunningham, Don P. Chambers, Curtiss O. Davis, Andrew Gerber, Rosalind Hetz, James P. McGuire, and William Pichel

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Phytoplankton Assemblage Structure and Primary Productivity Along 170° W in the South Pacific Ocean, Giacomo R. DiTullio, Mark E. Geesey, David R. Jones, Kendra L. Daly, Lisa Campbell, and Walker O. Smith

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A Synthetic Float Analysis of Upper-Limb Meridional Overturning Circulation Interior Ocean Pathways in the Tropical/Subtropical Atlantic, G. R. Halliwell Jr., Robert H. Weisberg, and D. A. Mayer

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A Loop Current Intrusion Case Study on the West Florida Shelf, Ruoying He and Robert H. Weisberg

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West Florida Shelf Circulation and Temperature Budget for the 1998 Fall Transition, Ruoying He and Robert H. Weisberg

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A Cloud-Free, Satellite-Derived, Sea Surface Temperature Analysis for the West Florida Shelf, Ruoying He, Robert H. Weisberg, Haiying Zhang, Frank E. Muller-Karger, and Robert W. Helber

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Interannual Volume Variability in the Tropical Pacific, Christina L. Holland and Gary T. Mitchum

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Dispersal of the Suwannee River Plume Over the West Florida Shelf: Simulation and Observation of the Optical and Biochemical Consequences of a Flushing Event, Jason K. Jolliff, John J. Walsh, Ruoying He, Robert H. Weisberg, Antoya Stovall-Leonard, Paula G. Coble, Robyn Conmy, Cynthia A. Heil, Bisman Nababan, Haiying Zhang, Chuanmin Hu, and Frank E. Muller-Karger

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Millennial- to Century-Scale Variability in Gulf of Mexico Holocene Climate Records, R. Z. Poore, H. J. Dowsett, S. Verardo, and Terrence M. Quinn

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SEA-COOS: A Model for a Multi-State, Multi-Institutional Regional Observation System, Harvey E. Seim, Bob Bacon, Charlie Barans, Madilyn Fletcher, Keith Gates, Rick Jahnke, Edward Kearns, Russ Lea, Mark E. Luther, Christopher N. K. Mooers, Jim Nelson, Dwayne Porter, Lynn K. Shay, Mike Spranger, Jack Thigpen, Robert H. Weisberg, and Francisco Werner

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Energetic Baroclinic Super-Tidal Oscillations on the Southeast Florida Shelf, Alexander Soloviev, Mark E. Luther, and Robert H. Weisberg

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Coastal Observatory Investigates Energetic Current Oscillations on Southeast Florida Shelf, Alexander Soloviev, Rebekah J. Walker, Robert H. Weisberg, and Mark E. Luther