This is a select list of works produced by the faculty of the USF College of Marine Science. Materials are included when two conditions are satisfied: 1) the creator approves inclusion and 2) the publisher allows the material to be placed in the repository. Please direct questions or requests to expand the list of materials to Jason Boczar.

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Submissions from 2020

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Physical Processes Influencing the Sedimentation and Lateral Transport of MOSSFA in the NE Gulf of Mexico, Kendra L. Daly, Ana C. Vaz, and Claire B. Paris

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Testing the Effect of MOSSFA (Marine Oil Snow Sedimentation and Flocculent Accumulation) Events in Benthic Microcosms, Edwin M. Foekema, Justine . S. van Eenennaam, David Hollander, Thomas B. P. Oldenburg, Jagoš R. Radović, Melissa Rohal, Isabel C. Romero, Patrick Schwing, and Albertinka J. Murk

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DNA Barcoding of Fish Eggs Collected off Northwestern Cuba and Across the Florida Straits Demonstrates Egg Transport by Mesoscale Eddies, Makenzie Kerr, Jeremy Browning, Eva‐Maria Bønnelycke, Yingjun Zhang, Chuanmin Hu, Maickel Armenteros, Steven Murawski, Ernst B. Peebles, and Mya Breitbart

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Deepwater Oil and Gas Production in the Gulf of Mexico and Related Global Trends, Steven Murawski, David Hollander, Sherryl Gilbert, and Adolfo Gracia

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A Predictive Strategy for Mapping Locations Where Future MOSSFA Events Are Expected, Albertinka Murk, David Hollander, Shuangling Chen, Chuanmin Hu, Yongxue Liu, Sophie Vonk, Patrick Schwing, Sherryl Gilbert, and Edwin Foekema

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The Effects of Experimental Oil-Contaminated Marine Snow on Meiofauna in a Microcosm, Melissa Rohal, Noe Barrera, Justine S. Van Eenennaam, Edwin M. Foekema, Paul A. Montagna, Albertinka J. Murk, Marissa Pryor, and Isabel Romero

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Multiple Hydrocarbon data from mangrove forests collected during a coastal survey conducted in the Bay of Campeche, southern Gulf of Mexico from 2016-08-09 to 2016-08-10, Isabel Romero and David Hollander

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Spatial Contrasts in Hepatic and Biliary PAHs in Tilefish (Lopholatilus chamaeleonticeps) throughout the Gulf of Mexico, with Comparison to the Northwest Atlantic, Susan M. Snyder, Jill A. Olin, Erin Pulster, and Steven Murawski

Submissions from 2019

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Input, output and complete run files for the Atlantis ecosystem model IXTOC oil spill simulations from Campeche Bay Atlantis model, Cameron Ainsworth

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Geochemical and Faunal Characterization in the Sediments off the Cuban North and Northwest Coast, Maickel Armenteros, Patrick Schwing, Rebekka Larson, Adrian Martínez-Suárez, Raúl Fernández-Garcés, David Hollander, and Gregg Brooks

A Response to Scientific and Societal Needs for Marine Biological Observations, Nicholas J. Bax, Patricia Miloslavich, Frank Muller-Karger, Valerie Allain, Ward Appeltans, Sonia Dawn Batten, Lisandro Benedetti-Cecchi, Pier Luigi Buttigie, Sanae Chiba, Daniel Paul Costa, J. Emmett Duffy, Daniel C. Dunn, Craig Richard Johnson, Raphael M. Kudela, David Obura, Lisa-Maria Rebelo, Yunne-Jai Shin, Samantha Elisabeth Simmons, and Peter Lloyd Tyack

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Riverine Calcium End-Members Improve Coastal Saturation State Calculations and Reveal Regionally Variable Calcification Potential, Sean Thomas Beckwith, Robert H. Byrne, and Pamela Hallock

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Evaluation of Evapotranspiration Variations as a Function of Relief and Terrain Exposure through Multivariate Statistical Analysis, R. W. Bosquilia, C. M.U Neale, S. N. Duarte, S. J. Longhi, S. D. Ferraz, Frank E. Muller-Karger, and M. J. McCarthy

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Evaluation of Evapotranspiration Variations According to Soil Type Using Multivariate Statistical Analysis, R. W. Bosquilia, C. M. U Neale, S. N. Duarte, S. J. Longhi, S. FD Ferraz, and Frank E. Muller-Karger

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Bulk density and porewater data collected onboard R/V Weatherbird II cruises WB-0813 and WB-1405 in the northern Gulf of Mexico from 2013-08-15 to 2013-09-27, Gregg R. Brooks and Rebekka A. Larson

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Bulk Density/Porewater of sediment cores collected aboard R/V Weatherbird II cruise WB-0517 in the Gulf of Mexico from 2017-05-11 to 2017-05-23, Gregg R. Brooks and Rebekka A. Larson

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Sediment texture & composition data collected aboard R/V Weatherbird II cruise WB-0517 in the Gulf of Mexico from 2017-05-11 to 2017-05-23, Gregg R. Brooks and Rebekka A. Larson

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Short-lived radioisotope (SLRad) data collected aboard R/V Justo Sierra cruise JS-0815 in the southern Gulf of Mexico from 2015-07-31 to 2015-08-08, Gregg R. Brooks and Rebekka A. Larson

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Short-lived radioisotope (SLRad) data collected aboard R/V Weatherbird II cruise WB-0517 in the Gulf of Mexico from 2017-05-11 to 2017-05-23, Gregg R. Brooks, Rebekka A. Larson, and Patrick Schwing

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Gulf of Mexico (GoM) Bottom Sediments and Depositional Processes: A Baseline for Future Oil Spills, Gregg R. Brooks, Rebekka A. Larson, Patrick Schwing, Arne R. Diercks, Maickel Armenteros, Misael Diaz-Asencio, Joan-Albert Sanchez-Cabeza, Ana C. Ruiz-Fernandez, Juan Carlos Herguera, Libia H. Pérez-Bernal, and David Hollander

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DNA Barcoding Reveals Clear Delineation Between Spawning Sites for Neritic Versus Oceanic Fishes in the Gulf of Mexico, Makenzie Burrows, Jeremy Browning, Mya Breitbart, Steven Murawski, and Ernst Peebles

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Statistical Simulation of Ocean Current Patterns Using Autoregressive Logistic Regression Models: a Case Study in the Gulf of Mexico, Helios Chiri, Ana J. Abascal, Sonia Castanedo, José A. A. Antolínez, Yonggang Liu, Robert H. Weisberg, and Raul Medina

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Evaluation of Florida Stone Crab Life History and Management Scenarios using Spawning Potential Ratios, Claire E. Crowley, David Chagaris, Ryan L. Gandy, and Kendra L. Daly

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Fecundity Assessment of Stone Crabs in the Eastern Gulf of Mexico, Claire E. Crowley, Colin P. Shea, Ryan L. Gandy, and Kendra L. Daly

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Keeping an Eye on Antarctic Ice Sheet Stability, Carlota Escutia, Robert M. DeConto, Robert Dunbar, Laura De Santis, Amelia E. Shevenell, and Timothy Naish

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Molecular Approaches for an Operational Marine Biodiversity Observation Network, Kelly D. Goodwin, Frank E. Muller-Karger, Anni Djurhuus, Lisa Zeigler Allen, Andrew E. Allen, John P. McCrow, and Gabrielle Canonico Hyde

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Bubble Farming: Scalable Microcosms for Diatom Biofuel and the Next Green Revolution, Richard Gordon, Clifford R. Merz, Shawn Gurke, and Benoît Schoefs

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Recent Outer-Shelf Foraminiferal Assemblages on the Carnarvon Ramp and Northwestern Shelf of Western Australia, Christian Haller, Pamela Hallock, Albert C. Hine, and Christopher G. Smith

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Distribution of Modern Salt-Marsh Foraminifera from the Eastern Mississippi Sound, U.S.A., Christian Haller, Christopher G. Smith, Pamela Hallock, Albert C. Hine, Lisa E. Osterman, and Terrence McCloskey

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Changes in Redox Conditions of Surface Sediments Following the Deepwater Horizon and Ixtoc 1 Events, David W. Hastings, Thea Bartlett, Gregg Brooks, Rebekka A. Larson, Kelly A. Quinn, Daniel Razionale, Patrick Schwing, Libia Hascibe Pérez Bernal, Ana Carolina Ruiz-Fernández, Joan-Albert Sánchez-Cabeza, and David Hollander

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Biological Oceanography of the Gulf of Mexico, Gary Hitchcock, Sumit Chakraborty, and Kendra L. Daly

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Spectral variability of oil slicks under different observing conditions derived from satellite and airborne optical remote sensing, Chuanmin Hu

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Characterization of the Sedimentation Associated with the Deepwater Horizon Blowout: Depositional Pulse, Initial Response, and Stabilization, Rebekka A. Larson, Gregg R. Brooks, Patrick Schwing, Arne R. Diercks, Charles W. Holmes, Jeffrey P. Chanton, and Misael Diaz-Asencio

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Predicting Culturable Enterococci Exceedances at Escambron Beach, San Juan, Puerto Rico using Satellite Remote Sensing and Artificial Neural Networks, Abdiel E. Laureano-Rosario, Andrew P. Duncan, Erin Michelle Symonds, Dragan A. Savic, and Frank Muller-Karger

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Natural and Anthropogenic Oil Impacts on Benthic Foraminifera in the Southern Gulf of Mexico, M. L. Machain-Castillo, A. C. Ruiz-Fernández, Adolfo Gracia, J. A. Sanchez-Cabeza, A. Rodríguez-Ramírez, H. M. Alexander-Valdés, L. H. Pérez-Bernal, X. A. Nava-Fernández, L. E. Gómez-Lizárraga, L. Almaraz-Ruiz, Patrick Schwing, and David Hollander

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Microbial Associations of Four Species of Algal Symbiont-Bearing Foraminifers from the Florida Reef Tract, USA, Makenna May Martin, Christina A. Kellogg, and Pamela Hallock

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Surface Layer Turbulence Parameters Derived from 1-S Wind Observations on the West Florida Shelf, Dennis A. Mayer, Jun A. Zhang, and Robert H. Weisberg

Expedition 374 Summary, Robert M. McKay, Laura De Santis, Denise K. Kulhanek, Imogen M. Browne, and Amelia E. Shevenell

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Expedition 374 Methods, Robert M. McKay, Laura De Santis, Denise K. Kulhanek, Imogen M. Browne, Amelia E. Shevenell, and Expedition 374 Scientists

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Expedition 374 Summary, Robert M. McKay, Laura De Santis, Denise K. Kulhanek, Imogen M. Browne, Amelia E. Shevenell, and Expedition 374 Scientists

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Ross Sea West Antarctic Ice Sheet History, Robert M. McKay, Laura De Santis, Denise K. Kulhanek, Imogen M. Browne, Amelia E. Shevenell, and Expedition 374 Scientists

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Site U1521, Robert M. McKay, Laura De Santis, Denise K. Kulhanek, Imogen M. Browne, Amelia E. Shevenell, and Expedition 374 Scientists

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Site U1522, Robert M. McKay, Laura De Santis, Denise K. Kulhanek, Imogen M. Browne, Amelia E. Shevenell, and Expedition 374 Scientists

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Site U1523, Robert M. McKay, Laura De Santis, Denise K. Kulhanek, Imogen M. Browne, Amelia E. Shevenell, and Expedition 374 Scientists

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Site U1524, Robert M. McKay, Laura De Santis, Denise K. Kulhanek, Imogen M. Browne, Amelia E. Shevenell, and Expedition 374 Scientists

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Site U1525, Robert M. McKay, Laura De Santis, Denise K. Kulhanek, Imogen M. Browne, Amelia E. Shevenell, and Expedition 374 Scientists

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Photochemical Efficiencies in Reef-Dwelling Anthozoans: Insights from "Survivor" Species, Natasha Mendez-Ferrer and Pamela Hallock

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Physicochemical and Colligative Investigation of α (Shrimp Shell)-and β (Squid Pen)-Chitosan Membranes: Concentration-Gradient-Driven Water Flux and Ion Transport for Salinity Gradient Power andSeparation Process Operations, Clifford R. Merz

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Ship Wakes in Tampa Bay, Steven D. Meyers and Mark E. Luther

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Global Observational Needs and Resources for Marine Biodiversity, Enrique Montes-Herrera and Frank Muller-Karger

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Bio-optical Data Submission to NASA SeaBASS, Frank Muller-Karger

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Evolving and Sustaining Ocean Best Practices and Standards for the Next Decade, Frank Muller-Karger

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Reimagining the Potential of Earth Observations for Ecosystem Service Assessments, Frank Muller-Karger

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Reimagining the Potential of Earth Observations for Ecosystem Service Assessments, Frank E. Muller-Karger

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Niskin Bottle Samples, Frank E. Muller-Karger, Kristen N. Buck, Kent A. Fanning, Laura Lorenzoni, Enrique Montes-Herrera, Digna Rueda-Roa, and Theresa McKee

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Essential Biodiversity Variables for Mapping and Monitoring Species Populations, Frank E. Muller-Karger, Walter Jetz, Melodie A. McGeoch, Robert Guralnick, Simon Ferrier, Jan Beck, Mark J. Costello, Miguel Fernandez, Gary N. Geller, Petr Keil, Cory Merow, Carsten Meyer, Frank E. Muller-Karger, Henrique M. Pereira, Eugenie C. Regan, Dirk S. Schmeller, and Eren Turak

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Water Temperature, Salinity, and Other Parameters from CTD Taken from the Research Vessel Hermano Gines at the CARIACO Ocean Time-Series Location in the Southeastern Caribbean Sea (Cariaco Basin) from 1995-11-08 to 2017-01-17, Frank E. Muller-Karger, Laura Lorenzoni, Enrique Montes-Herrera, and Digna Rueda-Roa

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Carbon Cycling in the North American Coastal Ocean: A Synthesis, Frank E. Muller-Karger and Lisa Robbins

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CARIACO HPLC, Pigment, and AOP Submission to NASA, Frank Muller-Karger and Chuanmin Hu

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Toward a Coordinated Global Observing System for Seagrasses and Marine Macroalgae, Frank Muller-Karger, Chuanmin M. Hu, Enrique Montes-Herrera, and Mengqiu Wang

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Time Series Composite CTD Profiles from R/V Hermano Ginés Cruises in the Cariaco Basin from 1995 through 2017 (CARIACO Ocean Time-Series Program), Frank Muller-Karger, Laura Lorenzoni, Enrique Montes-Herrera, and Digna Rueda-Roa

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Oxidative stress, genotoxicity, and immune response biomarkers measured in red snapper (Lutjanus campechanus) collected aboard multiple R/V Weatherbird II cruises in the Gulf of Mexico from 2015-08-20 to 2017-07-30, Steven A. Murawski, Kristina Deak, and Larry Dishaw

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Oxidative stress, genotoxicity, and immune response biomarkers measured in golden tilefish (Lopholatilus chamaeleonticeps) collected aboard multiple R/V Weatherbird II cruises in the Gulf of Mexico from 2015-08-17 to 2017-07-29, Steven Murawski, Kristina Deak, and Larry Dishaw

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Transcriptomics of female golden tilefish (Lopholatilus chamaeleonticeps) collected aboard multiple R/V Weatherbird II cruises in the Gulf of Mexico from 2015-08-15 to 2016-09-09, Steven Murawski, Kristina Deak, and Larry Dishaw

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A Predictive Strategy for Mapping Locations Where Future MOSSFA Events Are Expected, Albertinka J. Murk, David Hollander, Shuangling Chen, Chuanmin Hu, Yongxue Liu, Sophie M. Vonk, Patrick Schwing, Sherryl Gilbert, and Edwin Foekema

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Mississippi River and Campeche Bank (Gulf of Mexico) Episodes of Cross-Shelf Export of Coastal Waters Observed with Satellites, Daniel Otis

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Mississippi River and Campeche Bank (Gulf of Mexico) Episodes of Cross-Shelf Export of Coastal Waters Observed with Satellites, Daniel Otis, Matthieu Le Hénaff, Vassiliki H. Kourafalou, Lucas McEachron, and Frank Muller-Karger

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Far-Field Modeling of a Deep-Sea Blowout: Sensitivity Studies of Initial Conditions, Biodegradation, Sedimentation, and Subsurface Dispersant Injection on Surface Slicks and Oil Plume Concentrations, Natalie Perlin, Claire B. Paris, Igal Berenshtein, Ana C. Vaz, Robin Faillettaz, Zachary M. Aman, Patrick Schwing, Isabel C. Romero, Michael Schlüter, Andreas Liese, Nuttapol Noirungsee, and Steffen Hackbusch

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Pathological findings in red snapper livers collected aboard multiple R/V Weatherbird II cruises in the north central region, Gulf of Mexico from 2012-08-13 to 2017-08-01, Erin Pulster, S. Fogelson, and Steven A. Murawski

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Histological examination of livers of golden tilefish (Lopholatilus chamaeleonticeps) collected aboard multiple R/V Weatherbird II cruises in the Gulf of Mexico from 2012-08-14 to 2016-09-06, Erin Pulster, S. Fogelson, and S. Synder

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Hepatic polycyclic aromatic hydrocarbons (PAHs) concentrations in groupers collected aboard multiple research and fishing vessels in the Gulf of Mexico from 2011-07-07 to 2017-07-30, Erin Pulster, Justin Mrowicki, Steven A. Murawski, and Brigid Carr

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Hepatic polycyclic aromatic hydrocarbons (PAHs) concentrations in Red Hind (Epinephelus guttatus) collected aboard multiple R/V Weatherbird II cruises in the southern Gulf of Mexico (Mexico and Cuba) from 2015-09-18 to 2017-05-23, Erin Pulster and Steven A. Murawski

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Hepatic polycyclic aromatic hydrocarbons (PAHs) in Gulf and Southern Hake collected aboard multiple R/V Weatherbird II cruises in the Gulf of Mexico from 2012-08-21 to 2015-09-24, Erin Pulster, Steven A. Murawski, and Rachel Struch

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Concentrations of polycyclic aromatic hydrocarbons (PAHs) in liver tissue of golden tilefish collected aboard multiple R/V Weatherbird II cruises in the Gulf of Mexico from 2012-08-13 to 2017-08-01, Erin Pulster, S. M. Synder, and Steven A. Murawski

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Biliary polycyclic aromatic hydrocarbon (PAH) equivalents for 92 species of fish collected aboard multiple research and fishing vessels in the Gulf of Mexico from 2011-08-16 to 2018-08-22, Erin Pulster, S. Synder, Steven A. Murawski, Brigid Carr, Justin Mrowicki, Madison Schwaab, R. Struch, and G. Toro-Farmer

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Marine Oil Snow Sedimentation and Flocculent Accumulation (MOSSFA) Events: Learning from the Past to Predict the Future, Antonietta Quigg, Uta Passow, Kendra L. Daly, Adrian Burd, David Hollander, Patrick Schwing, and Kenneth Lee

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Hydrocarbon concentration data collected during a coastal survey conducted in the Bay of Campeche, southern Gulf of Mexico on 2016-08-09, Isabel Romero

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Hydrocarbon concentration data from sediment cores collected aboard R/V Justo Sierra cruise JS-0815 in the southern Gulf of Mexico from 2015-07-31 to 2015-08-08, Isabel C. Romero

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Long-Term Preservation of Oil Spill Events in Sediments: The Case for the Deepwater Horizon Oil Spill in the Northern Gulf of Mexico, Isabel C. Romero, Jeff Chanton, Brad E. Roseheim, Jagoš R. Radović, Patrick Schwing, David Hollander, Stephen R. Larter, and Thomas B. P. Oldenburg

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Prevalence of a vertically transmitted single-stranded DNA virus in spinybacked orbweavers (Gasteracantha cancriformis) from Florida, USA, Karyna Rosario, Kaitlin A. Mettel, Anthony M. Greco, and Mya Breitbart

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Prevalence of a Vertically Transmitted Single-stranded DNA Virus in Spinybacked Orbweavers (Gasteracantha cancriformis) From Florida, USA, Karyna Rosario, Kaitlin Mettel, Anthony Greco, and Mya Breitbart

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Survival and Recovery of the Foraminifer Amphistegina gibbosa and Associated Diatom Endosymbionts Following Up to 20 Months in Aphotic Conditions, Benjamin J. Ross and Pamela Hallock

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Minimum Information About an Uncultivated Virus Genome (MIUViG), Simon Roux, Evelien Adriaenssens, Bas Dutilh, Eugene Koonin, Andrew Kropinski, Mart Krupovic, Mya Breitbart, and Karyna Rosario

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Mercury in Sediment Cores from the Southern Gulf of Mexico: Preindustrial Levels and Temporal Enrichment Trends, Ana Carolina Ruiz-Fernández, M. Rangel-García, L. H. Pérez-Bernal, P. G. López-Mendoza, Adolfo Gracia, Patrick Schwing, David Hollander, F. Páez-Osuna, J. G. Cardoso-Mohedano, T. Cuellar-Martinez, and J. A. Sanchez-Cabeza

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Assessing Eukaryotic Biodiversity in the Florida Keys National Marine Sanctuary Through Environmental DNA Metabarcoding, Natalie Sawaya, Anni Djurhuus, Collin Closek, Megan Hepner, Emily Olesin, Lindsey Visser, Christopher Kelble, Katherine Hubbard, and Mya Breitbart

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CTD data collected onboard R/V Weatherbird II cruise WB-0717 in the Gulf of Mexico from 2017-07-19 to 2017-07-30, Patrick Schwing

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Environmental Setting, Stressors and Their Influence on Resilience of Benthic Fauna in the Gulf of Mexico, Patrick Schwing, Sarah Davies, Arne Diercks, Adrienne Correa, Isabel C. Romero, and Jason Sylvan

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The Sedimentary Record of MOSSFA Events in the Gulf of Mexico: A Comparison of the Deepwater Horizon (2010) and Ixtoc 1 (1979) Oil Spills, Patrick Schwing, David Hollander, Gregg R. Brooks, Rebekka A. Larson, David W. Hastings, Jeffrey P. Chanton, Sara A. Lincoln, Jagoš R. Radović, and Alette Langenhoff

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Impact and Resilience of Benthic Foraminifera in the Aftermath of the Deepwater Horizon and Ixtoc 1 Oil Spills, Patrick Schwing and Maria Luisa Machain-Castillo

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Benthic Faunal Baselines in the Gulf of Mexico: A Precursor to Evaluate Future Impacts, Patrick Schwing, Paul A. Montagna, Maria Luisa Machain-Castillo, Elva Escobar-Briones, and Melissa Rohal

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Physical and Biogeochemical Controls on the Distribution of Dissolved Cadmium and its Isotopes in the Southwest Pacific Ocean, M. Sieber, Tim M. Conway, G. F. de Souza, H. Obata, S. Takano, Y. Sohrin, and D. Vance

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Developing High Resolution Baseline Coast Resource Maps Using World View 2 Imagery for a Coastal Village in Fiji, Ashneel Ajay Singh, Anish Maharaj, Michelle Kumar, Priyatma Singh, Sanjay Singh, Frank Muller-Karger, Matthew James Mccarthy, Lionel Joseph, Herve Damlamian, and Zulfikar Begg

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Hepatobiliary Analyses Suggest Chronic PAH Exposure in Hakes (Urophycis spp.) Following the Deepwater Horizon Oil Spill, Rachel E. Struch, Erin Pulster, Andrea D. Schreier, and Steven A. Murawski

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The Challenges of Interpreting Oil–Water Spatial and Spectral Contrasts for the Estimation of Oil Thickness: Examples From Satellite and Airborne Measurements of the Deepwater Horizon Oil Spill, Shaojie Sun and Chuamin Hu

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Associations Between Chronic Exposure to Polycyclic Aromatic Hydrocarbons and Health Indices in Gulf of Mexico Tilefish (Lopholatilus chamaeleonticeps) Post Deepwater Horizon, Susan M. Syder, Erin Pulster, and Steven Murawski

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Pepper Mild Mottle Virus: Agricultural Menace Turned Effective Tool for Microbial Water Quality Monitoring and Assessing (Waste)water Treatment Technologies, Erin Symonds, Karyna Rosario, and Mya Breitbart

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Discovery of a novel potexvirus in the seagrass Thalassia testudinum from Tampa Bay, Florida, Noémi Van Bogaert, Karyna Rosario, Bradley Furman, Margaret Hall, Anthony Greco, and Mya Breitbart

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Dataset for: Ecotoxicological benthic impacts of experimental oil-contaminated marine snow deposition, Justine S. van Eenennaam, Melissa Rohal, Jagos R. Radovic, Thomas B. Oldenburg, Isabel Romero, Albertinka J. Murk, and Edwin M. Foekema

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Material Transports, Robert H. Weisberg

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The Coastal Ocean Circulation Influence on the 2018 West Florida Shelf K. brevis Red Tide Bloom, Robert H. Weisberg, Yonggang Liu, Chad Lembke, Chuanmin Hu, Katherine Hubbard, and Matthew Garrett