This is a select list of works produced by the faculty of the USF College of Marine Science. Materials are included when two conditions are satisfied: 1) the creator approves inclusion and 2) the publisher allows the material to be placed in the repository. Please direct questions or requests to expand the list of materials to Jason Boczar.

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Submissions from 2019

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Geochemical and Faunal Characterization in the Sediments off the Cuban North and Northwest Coast, Maickel Armenteros, Patrick Schwing, Rebekka Larson, Adrian Martínez-Suárez, Raúl Fernández-Garcés, David Hollander, and Gregg Brooks

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Gulf of Mexico (GoM) Bottom Sediments and Depositional Processes: A Baseline for Future Oil Spills, Gregg R. Brooks, Rebekka A. Larson, Patrick Schwing, Arne R. Diercks, Maickel Armenteros, Misael Diaz-Asencio, Joan-Albert Sanchez-Cabeza, Ana C. Ruiz-Fernandez, Juan Carlos Herguera, Libia H. Pérez-Bernal, and David Hollander

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Statistical Simulation of Ocean Current Patterns Using Autoregressive Logistic Regression Models: a Case Study in the Gulf of Mexico, Helios Chiri, Ana J. Abascal, Sonia Castanedo, José A. A. Antolínez, Yonggang Liu, Robert H. Weisberg, and Raul Medina

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Testing the Effect of MOSSFA (Marine Oil Snow Sedimentation and Flocculent Accumulation) Events in Benthic Microcosms, Edwin M. Foekema, Justine . S. van Eenennaam, David Hollander, Thomas B. P. Oldenburg, Jagoš R. Radović, Melissa Rohal, Isabel C. Romero, Patrick Schwing, and Albertinka J. Murk

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Changes in Redox Conditions of Surface Sediments Following the Deepwater Horizon and Ixtoc 1 Events, David W. Hastings, Thea Bartlett, Gregg Brooks, Rebekka A. Larson, Kelly A. Quinn, Daniel Razionale, Patrick Schwing, Libia Hascibe Pérez Bernal, Ana Carolina Ruiz-Fernández, Joan-Albert Sánchez-Cabeza, and David Hollander

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Characterization of the Sedimentation Associated with the Deepwater Horizon Blowout: Depositional Pulse, Initial Response, and Stabilization, Rebekka A. Larson, Gregg R. Brooks, Patrick Schwing, Arne R. Diercks, Charles W. Holmes, Jeffrey P. Chanton, and Misael Diaz-Asencio

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Natural and Anthropogenic Oil Impacts on Benthic Foraminifera in the Southern Gulf of Mexico, M. L. Machain-Castillo, A. C. Ruiz-Fernández, Adolfo Gracia, J. A. Sanchez-Cabeza, A. Rodríguez-Ramírez, H. M. Alexander-Valdés, L. H. Pérez-Bernal, X. A. Nava-Fernández, L. E. Gómez-Lizárraga, L. Almaraz-Ruiz, Patrick Schwing, and David Hollander

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Surface Layer Turbulence Parameters Derived from 1-S Wind Observations on the West Florida Shelf, Dennis A. Mayer, Jun A. Zhang, and Robert H. Weisberg

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A Predictive Strategy for Mapping Locations Where Future MOSSFA Events Are Expected, Albertinka J. Murk, David Hollander, Shuangling Chen, Chuanmin Hu, Yongxue Liu, Sophie M. Vonk, Patrick Schwing, Sherryl Gilbert, and Edwin Foekema

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Far-Field Modeling of a Deep-Sea Blowout: Sensitivity Studies of Initial Conditions, Biodegradation, Sedimentation, and Subsurface Dispersant Injection on Surface Slicks and Oil Plume Concentrations, Natalie Perlin, Claire B. Paris, Igal Berenshtein, Ana C. Vaz, Robin Faillettaz, Zachary M. Aman, Patrick Schwing, Isabel C. Romero, Michael Schlüter, Andreas Liese, Nuttapol Noirungsee, and Steffen Hackbusch

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Marine Oil Snow Sedimentation and Flocculent Accumulation (MOSSFA) Events: Learning from the Past to Predict the Future, Antonietta Quigg, Uta Passow, Kendra L. Daly, Adrian Burd, David Hollander, Patrick Schwing, and Kenneth Lee

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Long-Term Preservation of Oil Spill Events in Sediments: The Case for the Deepwater Horizon Oil Spill in the Northern Gulf of Mexico, Isabel C. Romero, Jeff Chanton, Brad E. Roseheim, Jagoš R. Radović, Patrick Schwing, David Hollander, Stephen R. Larter, and Thomas B. P. Oldenburg

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Prevalence of a vertically transmitted single-stranded DNA virus in spinybacked orbweavers (Gasteracantha cancriformis) from Florida, USA, Karyna Rosario, Kaitlin A. Mettel, Anthony M. Greco, and Mya Breitbart

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Environmental Setting, Stressors and Their Influence on Resilience of Benthic Fauna in the Gulf of Mexico, Patrick Schwing, Sarah Davies, Arne Diercks, Adrienne Correa, Isabel C. Romero, and Jason Sylvan

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The Sedimentary Record of MOSSFA Events in the Gulf of Mexico: A Comparison of the Deepwater Horizon (2010) and Ixtoc 1 (1979) Oil Spills, Patrick Schwing, David Hollander, Gregg R. Brooks, Rebekka A. Larson, David W. Hastings, Jeffrey P. Chanton, Sara A. Lincoln, Jagoš R. Radović, and Alette Langenhoff

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Impact and Resilience of Benthic Foraminifera in the Aftermath of the Deepwater Horizon and Ixtoc 1 Oil Spills, Patrick Schwing and Maria Luisa Machain-Castillo

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Benthic Faunal Baselines in the Gulf of Mexico: A Precursor to Evaluate Future Impacts, Patrick Schwing, Paul A. Montagna, Maria Luisa Machain-Castillo, Elva Escobar-Briones, and Melissa Rohal

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Physical and Biogeochemical Controls on the Distribution of Dissolved Cadmium and its Isotopes in the Southwest Pacific Ocean, M. Sieber, Tim M. Conway, G. F. de Souza, H. Obata, S. Takano, Y. Sohrin, and D. Vance

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The Coastal Ocean Circulation Influence on the 2018 West Florida Shelf K. brevis Red Tide Bloom, Robert H. Weisburg, Yonggang Liu, Chad Lembke, Chuanmin M. Hu, Katherine Hubbard, and Mathew Garrett

Submissions from 2018

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Adapting Multi-Frequency Echo-Sounders for Operation on Autonomous Vehicles, Rene Chave, Jan Buermans, David Lemon, J. Christopher Taylor, Chad Lembke, Christopher DeCollibus, Grace K. Saba, and Christian S. Reiss

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The Tampa Bay Coastal Ocean Model Performance for Hurricane Irma, Jing Chen, Robert H. Weisberg, Yonggang Liu, and Lianyuan Zheng

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The GEOTRACES Intermediate Data Product 2017, ConwayGEOTRACES and Tim M. Conway

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Gulf Stream Rings as a Source of Iron to the North Atlantic Subtropical Gyre, Tim M. Conway, Jaime B. Palter, and Gregory F. de Souza

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The Application of Novel Research Technologies by the Deep Pelagic Nekton Dynamics of the Gulf of Mexico (DEEPEND) Consortium, David English, Chuanmin M. Hu, Chad Lembke, and Isabel C. Romero

Replacement Times of a Spectrum of Elements in the North Atlantic Based on Thorium Supply, Christopher T. Hayes, Robert F. Anderson, Hai Cheng, Tim M. Conway, R. L. Edwards, Martin Q. Fleisher, Peng Ho, Kuo-Fang Huang, Seth G. John, and William M. Landing

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Cross-Shelf Exchange Associated With the Gulf Stream in the South Atlantic Bight: Direct Observations Using an Autonomous Underwater Glider, Ruoying He, Austin C. Todd, Chad Lembke, Todd Kellison, Chris Taylor, and David A. Mann

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High-Resolution Investigation of Event Driven Sedimentation: Northeastern Gulf of Mexico, Rebekka A. Larson, Gregg Brooks, Patrick Schwing, Charles W. Holmes, Savannah R. Carter, and David Hollander

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Using Three Acoustic Technologies on Underwater Gliders to Survey Fish, Chad Lembke, Susan Lowerre-Barbieri, David Mann, and Christopher J. Taylor

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Utilizing Gliders and Acoustics to Identify Fish Habitat Hotspots, Chad Lembke, David Mann, Chris Taylor, Alex Silverman, and Edmund Hughes

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Evaluation of Satellite-Derived SST Products in Identifying the Rapid Temperature Drop on the West Florida Shelf Associated with Hurricane Irma, Yonggang Liu, Robert H. Weisberg, Jason Law, and Boyin Huang

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Tracing the Incorporation of Carbon into Benthic Foraminiferal Calcite Following the Deepwater Horizon Event, Patrick Schwing, Jeffrey P. Chanton, Isabel C. Romero, David Hollander, Ethan A. Goddard, Gregg R. Brooks, and Rebekka A. Larson

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Resilience of Benthic Foraminifera in the Northern Gulf of Mexico following the Deepwater Horizon Event (2011–2015), Patrick Schwing, Bryan J. O'Malley, and David Hollander

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Gulf-wide Impacts, Recovery and Connectivity of Marine Invertebrates in the Context of Oil Spills and Environmental Variability, Patrick Schwing and Yadong Wang

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Enabling a Platform for Habitat and Marine Assessment with Real Time Monitoring and Synchronous Databasing, Alex Silverman, Chad Lembke, Steven Butcher, and Steven Murawski

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Ecosystem Model of the Entire Beaufort Sea Marine Ecosystem: A Temporal Tool for Assessing Food-Web Structure and Marine Animal Populations from 1970 to 2014, Paul M. Suprenand, Cameron H. Ainsworth, and Carie Hoover

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Ecological and Indigenous Community Impacts of Oil Spill Mortality in Alaskan Marine Ecosystems, Paul M. Suprenand, Carie Hoover, Cameron H. Ainsworth, L. Dornberger, and C. J. Johnson

Submissions from 2017

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Ecopath with Ecosim Model of the West Florida Shelf Representing 1980 for Harmful Algal Bloom Simulations, Cameron H. Ainsworth and Alisha Gray

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Inter-Calibration of a Proposed New Primary Reference Standard AA-ETH Zn for Zinc Isotopic Analysis, Corey Archer, Morten B. Anderson, Christophe Cloquet, Tim M. Conway, Shoufei Dong, Michael Ellwood, Rebekah Moore, Joey Nelson, and Mark Rehkamper

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Optical Backscattering Measured by Airborne Lidar and Underwater Glider, James H. Churnside, Richard D. Marchbanks, Chad Lembke, and Jordon Beckler

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The Camera-Based Assessment Survey System (C-BASS): A Towed Camera Platform for Reef Fish Abundance Surveys and Benthic Habitat Characterization in the Gulf of Mexico, Chad Lembke, Sarah Grasty, Alex Silverman, Heather Broadbent, Steven Butcher, and Steven Murawski

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Winds on the West Florida Shelf: Regional Comparisons between Observations and Model Estimates, Dennis A. Mayer, Robert H. Weisberg, Lianyuan Zheng, and Yonggang Liu

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The Acceleration of Dissolved Cobalt's Ecological Stoichiometry due to Biological Uptake, Remineralization, and Scavenging in the Atlantic Ocean, Mak A. Saito, Abagail E. Noble, Nicholas Hawco, Benjamin S. Twining, Daniel C. Ohnemus, Seth G. John, Phoebe Lam, Tim M. Conway, Rod Johnson, Dawn Moran, and Matthew McIlvin

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Constraining the Spatial Extent of Marine Oil Snow Sedimentation and Flocculent Accumulation Following the Deepwater Horizon Event Using an Excess 210Pb Flux Approach, Patrick Schwing, Greg Brooks, Rebecca Larson, C. W. Holmes, Bryan J. O'Malley, and David Hollander

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Impacts and Recovery of Benthic Marine Environments in the Aftermath of the DWH Event, Patrick Schwing, David Hollander, Paul Montagna, and Peter Santschi

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Characterizing the Variability of Benthic Foraminifera in the Northeastern Gulf of Mexico following the Deepwater Horizon Event (2010-2012), Patrick Schwing, Bryan J. O'Malley, Isabel C. Romero, M Martínez-Colón, D. W. Hastings, M. A. Glabach, E. M. Hladky, Anthony M. Greco, and David Hollander

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Southward Flow on the Western Flank of the Florida Current, Alexander V. Soloviev, Amy Hirons, Christopher Maingot, Cayla W. Dean, Richard E. Dodge, Alexander E. Yankovsky, Jon Wood, Robert H. Weisberg, Mark E. Luther, and Julian P. McCreary

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Echosounder for Biological Surveys Using Ocean Gliders, J. Christopher Taylor and Chad Lembke

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Mapping the Soundscape Off the SoutheasternUSA by Using Passive Acoustic Glider Technology, Carrie C. Wall, David A. Mann, Chad Lembke, Chris Taylor, Ruoying He, and Todd Kellison

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More Surprises in the Global Greenhouse: Human Health Impacts from Recent Toxic Marine Aerosol Formations, Due to Centennial Alterations of World-Wide Coastal Food Webs, John J. Walsh, Jason M. Lenes, Robert H. Weisberg, Lianyuan Zheng, Chuanmin Hu, Kent A. Fanning Ph.D., R. Snyder, and J. Smith

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Variability of Tropical Cyclone Rapid Intensification in the North Atlantic and Its Relationship with Climate Variations, Chunzai Wang, Xidong Wang, Robert H. Weisberg, and Michael L. Black

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On the Loop Current Penetration into the Gulf of Mexico, Robert H. Weisberg and Yonggang Liu

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On the Movement of Deepwater Horizon Oil to Northern Gulf Beaches, Robert H. Weisberg, Lianyuan Zheng, and Yonggang Liu

Submissions from 2016

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Predator-prey diet linkages with error range for the Gulf of Mexico fitted using maximum likelihood method, Cameron H. Ainsworth

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Island building in the South China Sea: detection of turbidity plumes and artificial islands using Landsat and MODIS data, Brian B. Barnes and Chuanmin Hu

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Toxicity and Mutagenicity of the Gulf of Mexico Waters during and after the Deepwater Horizon oil spill, July 2010 to August 2012, Jonelle Basso

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The Growth Response of Two Diatom Species to Atmospheric Dust from the Last Glacial Maximum, Tim M. Conway, Linn J. Hoffmann, Eike Breitbarth, Robert F. Strzepek, and Eric W. Wolff

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Intercomparison of Dissolved Iron Isotope Profiles from Reoccupation of three GEOTRACES Stations in the Atlantic Ocean, Tim M. Conway, Seth G. John, and F. Lacan

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Removal of Six Estrogenic Endocrine-Disrupting Compounds (EDCs) from Municipal Wastewater Using Aluminum Electrocoagulation, Monica M. Cook, Erin M. Symonds, Bert Gerber, Armando Hoare, Edward S. Van Vleet, and Mya Breitbart

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CTD and other environmental data for the northeastern Gulf of Mexico and west Florida shelf: June 2012 – August 2014, Kendra L. Daly

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Discrete chlorophyll data for the northeastern Gulf of Mexico and west Florida shelf: June 2012 – August 2014, Kendra L. Daly

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SIPPER plankton and marine snow abundance and distribution data for the northeastern Gulf of Mexico: June 2012 – August 2014, Kendra L. Daly

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Zooplankton abundance and distribution data for the northeastern Gulf of Mexico and west Florida shelf: June 2012 – August 2014, Kendra L. Daly

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Zooplankton Biomass on the West Florida Shelf, July 2010 – August 2014, Kendra L. Daly

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Zooplankton dry weight biomass data for the northeastern Gulf of Mexico and west Florida shelf: June 2012 – August 2014, Kendra L. Daly

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Assessing the Impacts of Oil-associated Marine Snow Formation and Sedimentation during and after the Deepwater Horizon Oil Spill, Kendra L. Daly, Uta Passow, Jeffrey Chanton, and David Hollander

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Gut Immunity in a Protochordate Involves a Secreted Immunoglobulin-type Mediator Binding Host Chitin and Bacteria, Larry J. Dishaw, Brittany Leigh, John P. Cannon, Assunta Liberti, M. Gail Mueller, Diana P. Skapura, Charlotte R. Karrer, Maria R. Pinto, Rosaria De Santis, and Gary W. Litman

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Spatial distributions of fish and invertebrates in the Gulf of Mexico for 2010-01-01 estimated using a statistical model, Michael Drexler

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Evaluating Climatic Response to External Radiative Forcing during the Late Miocene to Early Pliocene: New Perspectives from Eastern Equatorial Pacific (IODP U1338) and North Atlantic (ODP 982) Locations, Anna J. Drury, Cédric M. John, and Amelia E. Shevenell

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Dissolved Iron and Iron Isotopes in the Southeastern Pacific Ocean, Jessica N. Fitzsimmons, Tim M. Conway, Jong-Mi Lee, Richard Kayser, Kristen M. Thyng, Seth G. John, and Edward A. Boyle

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Changes in Sediment Redox Conditions Following the BP DWH Blowout Event, D. W. Hastings, Patrick Schwing, G. R. Brooks, R. A. Larson, J. L. Morford, T. Roeder, K. A. Quinn, T. Bartlett, Isabel C. Romero, and David Hollander

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Quantifying Trace Element and Isotope Fluxes at the Ocean-sediment Boundary: A Review., William B. Homoky, Thomas Weber, William M. Berelson, Tim M. Conway, Gideon M. Henderson, Marco van Hulten, Catherine Jeandel, Silke Severmann, and Alessandro Tagliabue

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Satellite, glider data, and field measurements to study harmful algae on the West Florida Shelf during 2011 and 2012, Chuanmin Hu

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Vertical Migration of Karenia brevis in the Northeastern Gulf of Mexico Observed from Glider Measurements, Chuanmin Hu, Brian B. Barnes, Lin Qi, Chad Lembke, and David English

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Developing a Smart Semantic Web with Linked Data and Models for Near-Real-Time Monitoring of Red Tides in the Eastern Gulf of Mexico, Chuanmin Hu, Brock Murch, Alina A. Corcoran, Lianyuan Zheng, Brian Burnel B., Robert H. Weisberg, Karen E. Atwood, and Jason M. Lenes

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A Practical Application of Reduced-Copper Antifouling Paint in Marine Biological Research, Andrea S Jerabek, Kara R Wall, and Christopher D Stallings

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Seascapes as a New Vernacular for Pelagic Ocean Monitoring, Management and Conservation, Maria T. Kavanaugh, Matthew J. Oliver, Francisco P. Chavez, Ricardo M. Letelier, Frank E. Muller-Karger, and Scott C. Doney

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Coral-Associated Bacterial Diversity Is Conserved across Two Deep-Sea Anthothela Species, Stephanie N. Lawler, Christina A Kellogg, Scott C. France, Rachel W. Clostio, Sandra D. Brooke, and Steve W. Ross

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Generation of Germ-Free /Ciona intestinalis for Studies of Gut-Microbe Interactions, Brittany A Leigh, Assunta Liberti, and Larry J Dishaw

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Dataset for: Simulating cell death in the termination of Karenia brevis blooms: Implications for predicting aerosol toxicity vectors to humans, Jason M. Lenes

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Offshore Forcing on the “Pressure Point” of the West Florida Shelf: Anomalous Upwelling and Its Influence on Harmful Algal Blooms, Yonggang Liu, Robert H. Weisberg, Jason M. Lenes, Lianyuan Zheng, Katherine Hubbard, and John J. Walsh

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Patterns of the Loop Current System and Regions of Sea Surface Height Variability in the Eastern Gulf of Mexico Revealed by the Self-Organizing Maps, Yonggang Liu, Robert H. Weisberg, Stefano Vignudelli, and Gary T. Mitchum

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Synchronicity between Ice Retreat and Phytoplankton Bloom in Circum‐Antarctic Polynyas, Yun Li, Rubao Ji, Meibing Jin, and Julienne Stroeve

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Sunlight Induced Chlorophyll fluorescence in the Near-Infrared Spectral Region in Natural Waters: Interpretations of the Narrow Reflectance Peak around 761nm, Yingcheng Lu, Linhai Li, Minwei Zhang, Shaojie Sun, and Chunguang Lv

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West Florida Shelf beach sediment PAH and dioctyl sodium sulfosuccinate concentrations, microtox luminescence and microscreen mutagenicity data, 2010 to 2013, Lauren D. McDaniel

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A Compilation of Global Bio-optical in Situ Data for Ocean-colour Satellite Applications, Frank Muller-Karger

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Lesion data from fish collected off Terrebonne Bay, LA to the Dry Tortugas, FL, 2011-2014, Steven Murawski

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PAH Analysis: Bile PAH metabolite concentrations in longline captured fish, Northern Gulf of Mexico, 2011, Steven Murawski

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PAH analysis: Muscle and liver PAH concentrations in longline captured fish, Northern Gulf of Mexico, 2011-2013, Steven Murawski

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PAH Analysis: Red Snapper Bile PAH Metabolite Concentrations, Northern Gulf of Mexico, 2012, Steven Murawski

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Golden Tilefish tissue and eye-lens stable isotopes and C:N ratios from the Gulf of Mexico, summer 2013, Jenny Fenton Ostroff

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Hearing in the Juvenile Green Sea Turtle (Chelonia mydas): A Comparison of Underwater and Aerial Hearing Using Auditory Evoked Potentials, Wendy E D Piniak, David A Mann, Craig A Harms, T Todd Jones, and Scott A Eckert

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Variability of Particle Size Distributions in the Bohai Sea and the Yellow Sea, Zhongfeng Qui, Deyong Sun, Chuanmin Hu, Sengquiang Wang, Lufei Zheng, Yu Huang, and Tian Peng

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Chemical analysis of sediment and fish species near the Hercules 265 blowout, Gulf of Mexico, 2013, Isabel Romero

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Hydrocarbons in deep-sea sediments following the 2010 Deepwater Horizon oil spill in the Northeast Gulf of Mexico, Isabel Romero

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Begomovirus-Associated Satellite DNA Diversity Captured Through Vector-Enabled Metagenomic (VEM) Surveys Using Whiteflies (Aleyrodidae), Karyna Rosario, Christian Marr, Arvind Varsani, Simona Kraberger, Daisy Stainton, Enrique Moriones, Jane E Polston, and Mya Breitbart

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Employing Extant Stable Carbon Isotope Data in Gulf of Mexico Sedimentary Organic Matter for Oil Spill Studies, Brad E. Rosenheim, Matthew A. Pendergraft, George C. Flowers, Robert Carney, José L. Sericano, Jeff Chanton, Zeynep Dincer, and Terry L. Wade

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Towards quantitative viromics for both double-stranded and single-stranded DNA viruses., Simon Roux, Natalie E Solonenko, Vinh T Dang, Bonnie T Poulos, Sarah M Schwenck, Dawn B Goldsmith, Maureen L Coleman, Mya Breitbart, and Matthew B Sullivan

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Linking Oceanographic Modeling and Benthic Mapping with Habitat Suitability Models for Pink Shrimp on the West Florida Shelf, Peter J. Rubec, Jesse Lewis, David Reed, Christi Santi, Robert H. Weisberg, Lianyuan Zheng, Chris Jenkins, Charles F. Ashbaugh, Curt Lashley, and Salvatore Versaggi

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Benthic Foraminifera Abundance, Stable Isotopes, Desoto Canyon Sediments, 2010-2012, Patrick Schwing

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Using Foraminifera to Assess Benthic Distribution, Impacts and Recovery following Sedimentary Oil Deposition Associated with the DWH and Ixtoc Events, Patrick Schwing, Michael Martinez-Colon, Maria Luisa Machain-Castillo, Isabel C. Romero, Jeff P. Chanton, Bryan J. O'Malley, Erika E Fridrik, Gregg Brooks, David Hastings, Rebekka A. Larson, and David J. Hollander