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Theses/Dissertations from 2011

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From Source to Sink: An Isotopic Perspective on the Biogeochemical Relationship between the Everglades and Florida Bay, Ana Maria Hoare

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High-Resolution Event Stratigraphy of mm-Scale Laminated Sediments from Coastal Salt Ponds: St. John, US Virgin Islands, Rebekka Amie Larson

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Impacts of Artificial Reefs on Surrounding Ecosystems, Sarine Manoukian

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Underwater Hearing in the Loggerhead Turtle (Caretta caretta): A Comparison of Behavioral and Auditory Evoked Potential Audiograms, Kelly Martin

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Seasonal Changes in the Sinking Particulate Flux and in the Nitrogen Cycle within the Euphotic and Twilight Zones of the Cariaco Basin, Venezuela, Enrique Montes-Herrera

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Improvements to a Real-Time, Satellite-Derived Surface Current Product (OSCAR) and Evaluation in the Intra-American Sea, Mindy Jo Robinson

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A Sedimentary Record of Regional Land-Use and Climate Change in the Manatee River, Manatee County, Florida, Patrick Schwing

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Foraminiferal Assemblages on Sediment and Reef Rubble at Conch Reef, Florida USA, Christy Michelle Stephenson

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Assessment of Fertility Potential in Bottlenose Dolphins (Tursiops truncatus): An ELISA-based Biomarker Analysis, Leslie Schwierzke Wade

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Dynamics of Stony Coral Assemblages on Patch Reefs of the Upper Florida Reef Tract, Including Biscayne National Park, Amy Wallace

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Potential Habitat of Acropora spp. on Florida Reefs, Katherine Wirt

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Sex and the Seas: Gene Transfer Agents, Elizabeth Young

Theses/Dissertations from 2010

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Molecular Detection of the Toxic Marine Diatom Pseudo-nitzschia multiseries, Jennifer A. Delaney

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The Life History and Energy Budget of Hippocampus erectus in Tampa Bay, Florida, Nicole M. Dunham

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Effects of a Shallow-Water Hydrothermal Vent Gradient on Benthic Calcifiers, Tutum Bay, Ambitle Island, Papua New Guinea, Brienne E. Engel

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Assessing the Ability of Soils and Sediment to Adsorb and Retain Cs-137 in Puerto Rico, Warner Ithier-Guzman

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Aspects of the Life History of the Snowy Grouper, Epinephelus niveatus, in the Gulf of Mexico, Kelley Kowal

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Passive Acoustic Studies of Estuarine Fish Populations of Southwest Florida, James Vincent Locascio

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The Economically Important Nitrogen Pathways of Southwest Florida, Elon M. Malkin

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Sound Production and Behavior of Red Grouper (Epinephelus morio) on the West Florida Shelf, Misty D. Montie

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Discovery of Novel Viruses From Animals, Plants, and Insect Vectors Using Viral Metagenomics, Terry Fei Fan Ng

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Microbialites from the Freshwater System of Cuatro Ciénegas, Mexico: Genomic, Molecular Organic, and Stable Isotopic Perspectives, Anthony G. Nitti

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Late Holocene Climate Variability From Northern Gulf of Mexico Sediments: Merging Inorganic and Molecular Organic Geochemical Proxies, Julie N. Richey

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Enhancing Virus Surveillance through Metagenomics: Water Quality and Public Health Applications, Karyna Rosario-Cora

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Linking Soil Loss to Sediment Delivery in Two Estuaries in Puerto Rico, Nekesha Bernadette Williams

Theses/Dissertations from 2009

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Non-Calanoid Copepods at the Bermuda Atlantic Time-Series Study (BATS) Station: Community Structure and Ecology, 1995-1999, Hussain Ali Al-Mutairi

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Characterization of the Underwater Light Environment and Its Relevance to Seagrass Recovery and Sustainability in Tampa Bay, Florida, Christopher J. Anastasiou

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Can Colored Dissolved Organic Material Protect Coral Reefs by Reducing Exposure to Ultraviolet Radiation?, Lore Michele Ayoub

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Development and Deployment of an Underwater Mass Spectrometer for Quantitative Measurements of Dissolved Gases, Ryan J. Bell

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Ovarian Morphology, Oogenesis, and Changes through the Annual Reproductive Cycle of the Female Blue Crab, Callinectes sapidus Rathbun, in Tampa Bay, Catalina E. Brown

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Evaluation of the Efficacy of the Minimum Size Rule in the Red Grouper and Red Snapper Fisheries With Respect to J and Circle Hook Mortality and Barotrauma and the Consequences for Survival and Movement, Karen Mary Burns

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Tracing Anthropogenic Wastes: Detection of Fluorescent Optical Brighteners in a Gradient of Natural Organic Matter Fluorescence, Laura Kellie Dixon

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Addressing the Problem of Land Motion at Tide Gauges, Kara J. Doran

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Ecological Dynamics of Livebottom Ledges and Artificial Reefs on the Inner Central West Florida Shelf, Jennifer Maria Dupont

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Towards the Development of a Coastal Prediction System for the Tampa Bay Estuary, Heather Holm Havens

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Closure Between Apparent and Inherent Optical Properties of the Ocean with Applications to the Determination of Spectral Bottom Reflectance, James Edward Ivey

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Cephalopods of the Broad Caribbean: Distribution, Abundance, and Ecological Importance, Heather L. Judkins

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Foraminiferal responses to arsenic in a shallow-water hydrothermal system in papua new guinea and in the laboratory, Bryan McCloskey

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Particulate carbon, nitrogen and phosphorus stoichiometry of south west Florida waters, Susan Mary Murasko

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Depredation and angler interactions involving bottlenose dolphins (Tursiops truncatus) in Sarasota Bay, Florida, Jessica R. Powell

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Shell Abnormalities in Archaias Angulatus (Foraminifera) from the Florida Keys: An Indication of Increasing Environmental Stress?, Heidi Lynne Souder

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The Characterization and Interpretation of the Spectral Properties of Karenia brevis through Multiwavelength Spectroscopy, Adam H. Spear

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Age, Growth, and Reproduction of Calamus proridens the Littlehead Porgy, from the Northeast Gulf of Mexico, Amanda J. Tyler-Jedlund

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Nutrient Distribution Effects from Freshwater Discharge at Franklin Lock and Dam (S-79) in 2005 and 2006 on the Caloosahatchee Estuary and San Carlos Bay, Fort Myers, Florida, Kristan M. Uhlenbrock

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Measurement of Dissolved Gas Concentrations in Natural Waters Utilizing an In-Situ, Membrane Inlet, Linear Quadrupole Mass Spectrometer, Peter Wenner

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Meltwater and Abrupt Climate Change During the Last Deglaciation: A Gulf of Mexico Perspective, Clare C. Williams

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Comparing Reef Bioindicators on Benthic Environments off Southeast Florida, Ryann A. Williams

Theses/Dissertations from 2008

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Can Waters Around Durney Key, Pasco County, Florida, Support Coral Recruitment to Artificial Substrates?, Kelley L. Anderson

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Brevetoxin Body Burdens in Seabirds of Southwest Florida, Karen E. Atwood

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Distribution Patterns of Larger Symbiont-Bearing Foraminifera of the Florida Reef Tract, USA, Rebekah Duncan Baker

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Temporal and Spatial Patterns in Optical Properties of Colored Dissolved Organic Matter on Florida’s Gulf Coast: Shelf to Stream to Aquifer, Robyn Nicole Conmy

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Antifreeze Proteins in Pelagic Fishes from Marquerite Bay (Western Antarctica), Tammy L. Cullins

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Paleoclimatic Reconstruction and Evaluation of Sub-Centennial Climate Variability in the Late Holocene Using Records from Massive Corals (New Caledonia), Tree-Rings (New Mexico) and Speleothems (China), Kristine Lee DeLong

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Investigating Environmental Change Due To Hypoxic Conditions On The Louisiana Continental Shelf: A Geochemical Approach, Marianne E. Dietz

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Epifaunal assemblage of a newly established oyster reef with two substrates, Ian M. Dow

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A 1400 Year Multi-Proxy Record of Hydrologic Variability in the Gulf Of Mexico: Exploring Ocean-Continent Linkages During the Late Holocene, Jennifer A. Flannery

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Vectors of Brevetoxins to Marine Mammals, Leanne J. Flewelling

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Determining the Usefulness of Aerobic and Anaerobic Enzyme Assays as Proxies for Rockfish Ecological Data., Erica M. Hudson

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Characterization of the Western Antarctic Peninsula Ecosystem: Environmental Controls on the Zooplankton Community, Marina Marrari

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Extracting a Climate Signal from the Skeletal Geochemistry of the Caribbean Coral Siderastrea siderea, Christopher Robert Maupin

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Benthic Microalgae and Nutrient Flux in Florida Bay, USA, Merrie Beth Neely

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Patch Reefs in Biscayne National Park, FL: Sediments, Foraminiferal Distributions, and a Comparison of Three Biotic Indicators of Reef Health, Alexa Ramirez

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Evolution and Field Application of a Plankton Imaging System, Andrew Walker Remsen

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Heat Fluxes in Tampa Bay, Florida, Kristin L. Sopkin

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Viruses Found in Raw Sewage and Their Potential to Indicate Fecal Pollution in Coastal Environments, Erin M. Symonds

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Orbital- to millennial-scale variability in Gulf of Mexico sea surface temperature and salinity during the late Pleistocene, Jessica L. Whitaker

Theses/Dissertations from 2007

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Oceanic Interfaces: Investigations of Biogeochemical Changes Across Nutriclines and Frontal Boundaries, Lori R. Adornato

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The Use of Microarrays in the Detection of the Gene Expression of Ribulose- 1,5- Bisphosphate Carboxylase/Oxygenase (RubisCO) in the Marine Environment, Kathryn Lafaye Bailey

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Trace Metals and Stable Isotopes as Tracers of Life History and Trophic Connections in Estuarine-Dependent Fish from Tampa Bay, Florida, Linae Marie Boehme-Terrana

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The Relationship of Initial Flooding Depositional Facies to Global Sea Level and Climate on The Marion Plateau, NE Australia (ODP Leg 194), Katherine T. Ciembronowicz

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Effects of Nutrients From the Water Column on the Growth of Benthic Microalgae in Permeable Sediments, Brian P. Darrow

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Acoustic Classification of Benthic Habitats in Tampa Bay, Shane C. Dunn

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Assessing the Health of Coral Reef Ecosystems in the Florida Keys at Community, Individual, and Cellular Scales, Elizabeth Fisher

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Comparative effects of the toxic dinoflagellate, Karenia brevis, on bivalve molluscs from Florida, James R. Leverone

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Bathymetric Alterations Due to Urbanization and Their Effects on Residual Salinity, Flow Field and Transport Time for Tampa Bay, Florida, Amanda J. Linville

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A three-dimensional biophysical model of light, nutrient, and grazing controls on phytoplankton competition affecting red tide maintenance on the west Florida shelf, Scott P. Milroy

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Molecular and genomic studies of temperate phages from Halomonas aquamarina and Bacillus spp. isolates from the Gulf of Mexico, Jennifer M. Mobberley

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The influence of the Loop Current on the diversity, abundance, and distribution of zooplankton in the Gulf of Mexico, Katie Rathmell

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A 1400-year multi-proxy record of climate variability from the northern Gulf of Mexico, Julie N. Richey

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Geomorphology of Submarine Spring West of Fort Myers, Florida, Shihadah M. Saleem

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Assessing the reproducibility of skeletal geochemistry records in Atlantic corals using Montastraea annularis coral heads from the Dry Tortugas, Florida, Kristine L. Stair

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Changes in abundance and distribution of humpback whales Megaptera novaeangliae in Hervey Bay Marine Park, Australia, based on aerial surveys conducted in 1992 and 2004, Lucía de la Paz Suzacq

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Brevetoxins in marine birds: Evidence of trophic transfer and the role of prey fish as toxin vector, Michelle Van Deventer

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Effects of extreme events on residual circulation for Tampa Bay, Florida, Monica Wilson

Theses/Dissertations from 2006

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Temporal and Spatial Distribution of Chlorophyll on the West Florida Shelf, Danylle N. Ault

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Micronektonic community composition and trophic structure within the bathypelagic zone in the eastern Gulf of Mexico, Scott E. Burghart

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An Evaluation of the Along Track Reef Imaging System (ATRIS) for Efficient Reef Monitoring and Rapid Groundtruthing of EAARL Lidar, Nicole O. Caesar

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The hearing abilities of elasmobranch fishes, Brandon M. Casper

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Monitoring water quality in Tampa Bay: Coupling in situ and remote sensing, Zhiqiang Chen

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Behavioral and auditory evoked potential (AEP) hearing measurements in odontocete cetaceans, Mandy Lee Hill Cook

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Hydrogen Isotopic Ratios of Algal and Terrestrial Organic Matter in Lake Tulane, Florida: From a Modern Calibration to the Reconstruction of Paleoclimatic and Paleohydrologic Conditions, Eric Charles Cross

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Reconstructing 20th century SST variability in the southwest pacific: A replication study using multiple coral Sr/Ca records from New Caledonia, Kristine L. DeLong

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Modeling the Advantages and Disadvantages of the Coral-Algal Symbiosis, Dana Joy Gaydos

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Assessment of Image Analysis as a Measure of Scleractinian Coral Growth, Steven K. Gustafson

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Strategic geographic positioning of sea level gauges to aid in early detection of tsunamis in the Intra-Americas sea, Joshua I. Henson

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Abrupt climate change during the last glacial period: A Gulf of Mexico perspective, Heather W. Hill

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Tropical Atlantic and Caribbean climate variations during the past eight centuries, Kelly Halimeda Kilbourne

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Saharan dust and phosphatic fidelity: A three dimensional biogeochemical model of Trichodesmium on the West Florida shelf, Jason M. Lenes

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Patterns and dynamics of ocean circulation variability on the West Florida shelf, Yonggang Liu

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Sub-Centennial Scale Climatic and Hydrologic Variability in the Gulf of Mexico during the Early Holocene, Jenna Meredith LoDico