Green Archiving For USF Faculty: Getting Started

  1. Update your CV to include all work completed since arriving at USF.
  2. Write a short email giving us permission to post your research. We will seek copyright permission to post the digital item(s).
  3. Attach your CV and send the email to: scholarcommons@usf.edu

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If you would like to self-submit your scholarly works you can submit content here.

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Submissions from 2016

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E-Petition Popularity: Do Linguistic and Semantic Factors Matter?, Loni Hagen, Teresa M. Harrison, Özlem Uzuner, William May, Tim Fake, and Satya Katragadda

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A Comparison of Rule-based Analysis with Regression Methods in Understanding the Risk Factors for Study Withdrawal in a Pediatric Study, Mona Haghighi, Suzanne B. Johnson, Xiaoning Qian, Kristian F. Lynch, Kendra Vehik, Shuai Huang, and The TEDDY Study Group

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The Effect of Noise Fluctuation and Spectral Bandwidth on Gap Detection, Joseph W. Hall III, Emily Buss, Erol J. Ozmeral, and John H. Grose

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Two-Dimensional Kinetic Shape Dynamics: Verification and Application, Ismet Handžić, Haris Muratagic, and Kyle B. Reed

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Changes in Sediment Redox Conditions Following the BP DWH Blowout Event, D. W. Hastings, Patrick Schwing, G. R. Brooks, R. A. Larson, J. L. Morford, T. Roeder, K. A. Quinn, T. Bartlett, Isabel C. Romero, and David Hollander

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Predicting Malignant Nodules from Screening CT Scans, Samuel Hawkins, Hua Wang, Ying Liu, Alberto Garcia, Olya Stringfield, Henry Krewer, Qiang Li, Dmitry Cherezov, Matthew Schabath, Lawrence O. Hall, and Robert J. Gillies

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Emotion Regulation During Threat: Parsing the Time Course and Consequences of Safety Signal Processing, Kathryn R. Hefner, Edelyn Verona, and John J. Curtin

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Functional Performance Differences between the Genium and C-Leg Prosthetic Knees and Intact Knees, Michael J. Highsmith, Jason T. Kahle, Rebecca M. Miro, M. E. Cress, Derek J. Lura, William S. Quillen, Stephanie Carey, Rajiv V. Dubey, and Larry J. Mengelkoch

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Greenland Subglacial Drainage Evolution Regulated by Weakly Connected Regions of the Bed, Matthew J. Hoffman, Lauren C. Andrews, Stephen F. Price, Ginny A. Catania, Thomas A. Neumann, Martin P. Lüthi, Jason Gulley, Claudia Ryser, Robert L. Hawley, and Blaine Morriss

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Quantifying Trace Element and Isotope Fluxes at the Ocean-sediment Boundary: A Review., William B Homoky, Thomas Weber, William M Berelson, Tim M Conway, Gideon M Henderson, Marco van Hulten, Catherine Jeandel, Silke Severmann, and Alessandro Tagliabue

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Recent Data Sets on Object Manipulation: A Survey, Yongqiang Huang, Matteo Bianchi, Minas Liarokapis, and Yu Sun

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Datasets on Object Manipulation and Interaction: A Survey, Yongqiang Huang and Yu Sun

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Anions Govern Cell Volume: A Case Study of Relative Astrocytic and Neuronal Swelling in Spreading Depolarization, Niklas Hübel and Ghanim Ullah

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Impact of Not Addressing Partially Cross-Classified Multilevel Structure in Testing Measurement Invariance: A Monte Carlo Study, Myung H. Im, Eun Sook Kim, Oi-Man Kwok, Myeongsun Yoon, and Victor L. Willson

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Signal Enhanced Holographic Fluorescence Microscopy with Guide-star Reconstruction, Changwon Jang, David C. Clark, Jonghyun Kim, Byoungho Lee, and Myung K. Kim

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Emotional Confidants in Ethnic Communities: Social Network Analysis of Korean American Older Adults, Yuri Jang PhD, Kyungmin Kim PhD, Nan Sook Park, and David A. Chiriboga

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Health Vulnerability of Immigrants with Limited English Proficiency: A Study of Older Korean Americans, Yuri Jang, Hyunwoo Yoon, Nan Sook Park, and David A. Chiriboga

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Darwinian Sex Roles Confirmed across the Animal Kingdom, Tim Janicke, Ines K. Häderer, Marc J. Lajeunesse, and Nils Anthes

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NEDDylation Promotes Stress Granule Assembly, Aravinth Kumar Jayabalan, Anthony Sanchez, Ra Young Park, Sang Pil Yoon, Gum-Yong Kang, Je-Hyun Baek, Paul Anderson, Younghoon Kee, and Takbum Ohn

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Combined Effects of Pesticides and Trematode Infections on Hourglass Tree Frog Polypedates cruciger., Uthpala A. Jayawardena, Jason R. Rohr, Ayanthi N. Navaratne, Priyanie H. Amerasinghe, and Rupika S. Rajakaruna

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Glycine N-acyltransferase-like 3 is Responsible for Long-chain N-acylglycine Formation in N18TG2 Cells, Kristen A Jeffries, Daniel R Dempsey, Emma K Farrell, Ryan L Anderson, Gabrielle J Garbade, Tatyana S Gurina, Imran Gruhonjic, Carly A Gunderson, and David J Merkler

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A Low-loss Metasurface Antireflection Coating on Dispersive Surface Plasmon Structure, Jiyeon Jeon, Khagendra Bhattarai, Deok-Kee Kim, Jun Oh Kim, Augustine Urbas, Sang Jun Lee, Zahyun Ku, and Jiangfeng Zhou

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A Practical Application of Reduced-Copper Antifouling Paint in Marine Biological Research, Andrea S Jerabek, Kara R Wall, and Christopher D Stallings

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The Great Chain of Being: Manifesto on the Problem of Agency in Science Communication, Meredith A. Johnson and Nathan Johnson

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Scholar Commons Annual Report: FY 2014-2015, Chelsea Johnston, Carol Ann Borchert, and Jason Boczar

Controller, Steven E. Jones

New Media and Modeling: Games and the Digital Humanities, Steven E. Jones

Roberto Busa, S. J., and the Emergence of Humanities Computing: The Priest and the Punched Cards, Steven E. Jones

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The Emergence of the Digital Humanities (as the Network is Everting), Steven E. Jones

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Counter Machines and Crystallographic Structures, Natasha Jonoska, Mile Krajcevski, and Gregory McColm

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Performing the ‘Two-Body Problem’: An Analysis of Academic Couples’ Career Sensemaking as Revealed Through Joint Storytelling, Jane Jorgenson

Radiomics of Lung Nodules: A Multi- Institutional Study of Robustness and Agreement of Quantitative Imaging Features, Jayashree Kalpahty-Cramer, Artem Mamomov, Binsheng Zhao, Lin Lu, Dmitry Cherezov, Sandy Napel, Sebastian Echegrary, Daniel Rubin, Michael McNitt-Gray, and Dmitry Goldgof

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A Buffer Model Account of Behavioral and ERP Patterns in the Von Restorff Paradigm, Siri-Maria Kamp, Melissa Lehman, Kenneth J. Malmberg, and Emanuel Donchin

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Communication Perspectives on a Luxury Brand Organization: The Case of Georg Jensen, Esben Karmark, Robyn Remke, Patrice M. Buzzanell, Brigid Carroll, Gail Fairhurst, Flemming Holm, and Lars Thøger Christensen

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Seascapes as a New Vernacular for Pelagic Ocean Monitoring, Management and Conservation, Maria T. Kavanaugh, Matthew J. Oliver, Francisco P. Chavez, Ricardo M. Letelier, Frank E. Muller-Karger, and Scott C. Doney

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Building a Concept Inventory for Numerical Methods: a Chronology, Autar Kaw, Yingyan Lou, Andrew Scott, and Ronald L. Miller

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Role of Deubiquitinating Enzymes in DNA Repair, Younghoon Kee and Tony T. Huang

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Using Narrative Inquiry to Understand Persistently Disciplined Middle School Students, Brianna L. Kennedy-Lewis, Amy S. Murphy, and Tanetha J. Grosland

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Molecular Mechanism of Protein Kinase Recognition and Sorting by the Hsp90 Kinome-Specific Cochaperone Cdc37, Dimitra Keramisanou, Adam Aboalroub, Ziming Zhang, Wenjun Liu, Devon Marshall, Andrea Diviney, Randy W. Larsen, Ralf Landgraf, and Ioannis Gelis

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Identification of Neuregulin-2 as a Novel Stress Granule Component, Jin Ah Kim, Aravinth K. Jayabalan, Vinoth K. Kothandan, Ramesh Mariappan, Younghoon Kee, and Takbum Ohn

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Human-Associated Bacteroides spp. and Human Polyomaviruses as Microbial Source Tracking Markers in Hawaii, Marek Kirs, Roberto A Caffaro-Filho, Mayee Wong, Valerie J. Harwood, Philip Moravcik, and Roger S Fujioka

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Discriminability and Perceptual Saliency of Temporal and Spectral Cues for Final Fricative Consonant Voicing in Simulated Cochlear-Implant and Bimodal Hearing, Ying-Yee Kong, Matthew B. Winn, Katja Poelmann, and Gail S. Donaldson

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Positive Affectivity is Dampened in Youths with Histories of Major Depression and Their Never-Depressed Adolescent Siblings, Maria Kovacs, Lauren M. Bylsma, Ilya Yaroslavsky, Jonathan Rottenberg, Charles J George, Enikő Kiss, Kitti Halas, István Benák, Ildiko Baji, Ágnes Vetro, and Krisztina Kapornai

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On Fast Calculation of Addition Chains for Isogeny-Based Cryptography, Brian Koziel, Reza Azarderakhsh, David Jao, and Mehran Mozaffari Kermani

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Fast Hardware Architectures for Supersingular Isogeny Diffie-Hellman Key Exchange on FPGA, Brian Koziel, Reza Azarderakhsh, and Mehran Mozaffari Kermani

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NEON-SIDH: Efficient Implementation of Supersingular Isogeny Diffie-Hellman Key Exchange Protocol on ARM, Brian Koziel, Amir Jalali, Reza Azarderakhsh, David Jao, and Mehran Mozaffari Kermani

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Inferring Origin-Destination Pairs and Utility-Based Travel Preferences of Shared Mobility System Users in a Multi-Modal Environment, Anshuman Anjani Kumar, Jee Eun Kang, Changhyun Kwon, and Alexander Nikolaev

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Julia Programming for Operations Research: A Primer on Computing, Changhyun Kwon

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Method for Measuring the Unbinding Energy of Strongly-bound Membrane-associated Proteins, Elisa La Bauve, Briana C. Vernon, Dongmei Ye, David M. Rogers, Cathryn M. Siegrist, Bryan D. Carson, Susan B. Rempe, Aihua Zheng, Margaret Kielian, Andrew P. Shreve, and Michael S. Kent

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Knee Orthosis with Variable Stiffness and Damping that Simulates Hemiparetic Gait, Christina-Anne Lahiff, Tyagi Ramakrishnan, Seok H. Kim, and Kyle B. Reed

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Encrustation of Inarticulate Brachiopods on Scaphitid Ammonites and Inoceramid Bivalves from the Upper Cretaceous U. S. Western Interior, Neil H. Landman, Joshua S. Slattery, and Peter J. Harries

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Coral-Associated Bacterial Diversity Is Conserved across Two Deep-Sea Anthothela Species, Stephanie N. Lawler, Christina A Kellogg, Scott C. France, Rachel W. Clostio, Sandra D. Brooke, and Steve W. Ross

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Generation of Germ-Free /Ciona intestinalis for Studies of Gut-Microbe Interactions, Brittany A Leigh, Assunta Liberti, and Larry J Dishaw

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New URJC-1 Material with Remarkable Stability and Acid-Base Catalytic Properties, Pedro Leo, Ferdnando Martinez, Guillermo Calleja, David Briones, and Lukasz Wojtas

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Toward a Pan-cultural Typology of Deception Motives, Timothy R. Levine, Mohamed Vaqas Ali, Marleah Dean, Rasha A. Abdulla, and Karina Garcia-Ruano

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Response of Wetland Soil Carbon to Groundwater Conservation: Probabilistic Outcomes from Error Propagation, David B. Lewis

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Processing of Individual Items during Ensemble Coding of Facial Expressions, Huiyun Li, Luyan Ji, Ke Tong, Naixin Ren, Wenfeng Chen, Chang Hong Liu, and Xiaolan Fu

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Rube Goldberg Salad System: Teaching Systems Theory in Communication, Jasmine R. Linabary, Ziyu Long, Ashton Mouton, Ranjani L. Rao, and Patrice M. Buzzanell

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Video-Based 3D Reconstruction, Laparoscope Localization and Deformation Recovery for Abdominal Minimally Invasive Surgery: A Survey, Bingxiong Lin, Yu Sun, Xiaoning Qian, Dmitry Goldgof, Richard D. Gitlin, and Yuncheng You

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Crystal Structure of Ethyl 4-[(E)-(4-hy-droxy-3-meth-oxy-benzyl-idene)amino]-benzoate: a p-hy-droxy Schiff Base, Jing Ling, Padmini Kavuru, Lukasz Wojtas, and Keith Chadwick

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Danger Alert: Mitigating Wrong-Way Driving through Red RRFB Implementation, Pei-Sung Lin and Seckin Ozkul

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Evaluation on the Perceived Effectiveness of Red RRFB Configurations to Reduce Wrong-Way Driving, Pei-Sung Lin, Seckin Ozkul, and Chester Chandler III

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Impact of Connected Vehicles and Autonomous Vehicles on Future Transportation, Pei-Sung Lin, Zhenyu Wang, and Rui Guo

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A Pilot Study on Interactions between Drivers and Pedestrian Features at Signalized Intersections-Using the SHRP2 Naturalistic Driving Study Data, Pei-Sung Lin, Zhenyu Wang, Rui Guo, and Achilleas Kourtellis

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Thin InSb Layers with Metallic Gratings: A Novel Platform for Spectrally-Selective THz Plasmonic Sensing, Shuai Lin, Khagendra Bhattarai, Jiangfeng Zhou, and Diyar Talbayev

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Task-Oriented Grasp Planning Based on Disturbance Distribution, Yun Lin and Yu Sun

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Scaling Law for Electrocaloric Temperature Change in Antiferroelectrics, Sergey Lisenkov, B. K. Mani, E. Glazkova, C. W. Miller, and Inna Ponomareva

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Ultrafiltration and Microarray for Detection of Microbial Source Tracking Marker and Pathogen Genes in Riverine and Marine Systems, Xiang Li, Valerie J. Harwood, Bina Nayak, and Jennifer L Weidhaas

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Synchronicity between Ice Retreat and Phytoplankton Bloom in Circum‐Antarctic Polynyas, Yun Li, Rubao Ji, Meibing Jin, and Julienne Stroeve

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Positioning Work Amid Discontinuities and Continuities: Chinese Post80s Workers’ Dialogical Constructions of Meanings of Work, Ziyu Long, Patrice M. Buzzanell, and Kai Kuang

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Enhanced Nutrient Management of Stormwater through a Field Demonstration of Nitrogen Removal in a Modified Bioretention System, Emma V. Lopez, Thomas J. Lynn, Mackenzie Peterson, Sarina Ergas, Maya A. Trotz, and James Mihelcic

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Intramolecular 1,5-C(Sp3)–H Radical Amination via Co(II)-Based Metalloradical Catalysis for Five-Membered Cyclic Sulfamides, Hongjian Lu, Kai Lang, Huiling Jiang, Lukasz Wojtas, and X Peter Zhang

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Sunlight Induced Chlorophyll fluorescence in the Near-Infrared Spectral Region in Natural Waters: Interpretations of the Narrow Reflectance Peak around 761nm, Yingcheng Lu, Linhai Li, Minwei Zhang, Shaojie Sun, and Chunguang Lv

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Unique Correlates of Heart Failure and Cancer Caregiver Satisfaction With Hospice Care, Meredith A. MacKenzie, Harleah G. Buck, Salimah H. Meghani, and Barbara Riegel

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Eigenstress Model for Electrochemistry of Solid Surfaces, Hongxin Ma, Xilin Xiong, Panpan Gao, Xi Li, Yu Yan, Alex A. Volinsky, and Yanjing Su

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Thermal Comfort and Perception Inside Air-Conditioned Areas, Ahmad Manasrah, Rasim O. Guldiken, and Kyle B. Reed

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Context and the Advancement of a Global Science of Human Development: A Commentary, Kofi Marfo

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Purposeful Entanglements: A New Materialist Analysis of Transformative Interviews, Travis M. Marn and Jennifer R. Wolgemuth

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Structural and Activity Characterization of Human PHPT1 after Oxidative Modification, Daniel R. Martin, Priyanka Dutta, Shikha Mahajan, Sameer Varma, and Stanley M. Stevens Jr.

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Activating Clinical Trials: A Process Improvement Approach, Diego Martinez, Athanasios Tsalatsanis, Ali Yalcin, José L. Zayas-Castro, and Benjamin Djulbegovic

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Restricted Mobility of Specific Functional Groups Reduces Anti-cancer Drug Activity in Healthy Cells, Murillo L. Martins, Rosanna Ignazzi, Juergen Eckert, Benjamin Watts, Ramon Kaneno, Willian F Zambuzzi, Luke Daemen, Margarida J Saeki, and Heloisa N Bordallo

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COMT and OPRM1 Genotype Associations with Daily Knee Pain Variability and Activity Induced Pain, Lynn M. Martire, Stephanie J. Wilson, Brent J. Small, Yvette P. Conley, Piotr K. Janicki, and Martin J. Sliwinski

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Digital Storytelling as Racial Justice: Digital Hopes for Deconstructing Whiteness in Teacher Education, Cheryl E. Matias and Tanetha J. Grosland

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Factors Associated with Married Women’s Support of Male Circumcision for HIV Prevention in Uganda: A Population Based Cross–Sectional Study, Komi Mati, Korede K. Adegoke, and Hamisu M. Salihu

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Random Walks in a Sparse Random Environment, Anastasios Matzavinos, Alexander Roitershtein, and Youngsoo Seol

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Attention Demands of Language Production in Adults Who Stutter, Nathan D. Maxfield, Wendy L. Olsen, Daniel Kleinman, Stefan A. Frisch, Victor S. Ferreira, and Jennifer J. Lister

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Fear Conditioning and Extinction in Youth with Obsessive-compulsive Disorder, Joseph F. McGuire, Scott P. Orr, Monica S. Wu, Adam B. Lewin, Brent J. Small, Vicky Phares, Tanya K. Murphy, Sabine Wilhelm, Daniel S. Pine, Daniel Geller, and Eric A. Storch

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Inactivation of Peptidylglycine α-hydroxylating Monooxygenase by Cinnamic Acid Analogs, Neil R. McIntyre, Edward W. Lowe Jr, Matthew R. Battistini, James W. Leahy, and David J. Merkler

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Planning for climate change: The Need for Mechanistic Systems-based Approaches to Study Climate Change Impacts on Diarrheal Diseases, Jonathan E. Mellor, Karen Levy, Julie Zimmerman, Mark Elliott, Jamie Bartram, Elizabeth Carlton, Thomas Clasen, Rebecca Dilingham, Joseph Eisenberg, Richard Guerrant, Daniele Lantagne, James Mihelcic, and Kara Nelson

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Assessing the Role of Preknowledge in Force Compensation during a Tracking Task, Dimitrios Menychtas, Tyler Sullins, Benjamin Rigsby, Stephanie Carey, and Kyle B. Reed

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Identification of Ecdysone Hormone Receptor Agonists as a Therapeutic Approach for Treating Filarial Infections, Amruta S Mhashilkar, Sai L Vankayala, Canhui Liu, Fiona Kearns, Priyanka Mehrotra, George Tzertzinis, Subba R Palli, H. Lee Woodcock III, and Thomas R Unnasch

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Source Apportionment of Wet-Deposited Atmospheric Mercury in Tampa, Florida, Ryan Michael, Amy L. Stuart, Maya Trotz, and Fenda Akiwumi

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Dielectric Analysis of Aqueous Poly(l-glutamic acid) and Poly-l-(glutamic acid4, Tyrosine1) Solutions at High Frequencies from Capacitance Measurements, Jorge Monreal, Tatiana Eggers, and Manh-Huong Phan

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Global Regulator of Virulence A (GrvA) Coordinates Expression of Discrete Pathogenic Mechanisms in Enterohemorrhagic Escherichia coli through Interactions with GadW-GadE, Jason K. Morgan, Ronan K. Carroll, Carly M. Harro, Khoury W Vendura, Lindsey N. Shaw, and James T. Riordan

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Modeling the Influence of Various Water Stressors on Regional Water Supply Infrastructures and their Embodied Energy, Weiwei Mo and Qiong Zhang

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Lightweight Hardware Architectures for Fault Diagnosis Schemes of Efficiently-Maskable Cryptographic Substitution Boxes, Mehran Mozaffari Kermani and Reza Azarderakhsh

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Multidisciplinary Approaches and Challenges in Integrating Emerging Medical Devices Security Research and Education, Mehran Mozaffari Kermani, Reza Azarderakhsh, and Mehdi Mirakhorli

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Error Detection Reliable Architectures of Camellia Block Cipher Applicable to Different Variants of Its Substitution Boxes, Mehran Mozaffari Kermani, Reza Azarderakhsh, and Jiafeng Xie

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Efficient Error Detection Architectures for CORDIC through Recomputing with Encoded Operands, Mehran Mozaffari Kermani, Rajkuma Ramadoss, and Reza Azarderakhsh

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A Compilation of Global Bio-optical in Situ Data for Ocean-colour Satellite Applications, Frank Muller-Karger